Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (543), Expect = 2e-59
 Identities = 131/366 (35%), Positives = 207/366 (56%), Gaps = 2/366 (0%)

Query: 212 QQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLT 271
           Q  +   EQ  + V + +++LVV+ ++ I    ++ R+I  P++      +R  D  DLT
Sbjct: 317 QVISAKKEQQTAVVQLLSVALVVL-LVGIFAAFLITRQITVPLNSTVIAARRIADG-DLT 374

Query: 272 LRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQ 331
                   DEL ++  T+  +  S    I  I      I++ ++ + ++++Q     + Q
Sbjct: 375 HDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQ 434

Query: 332 DQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEF 391
             E++  ATAM EM S +  V+++T  A + A  A + A +   V +   RE   L GE 
Sbjct: 435 KNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEV 494

Query: 392 QKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 451
           Q+  E +Q+L  +S  +G+V+DVIKA+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 495 QQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 554

Query: 452 SLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAK 511
           SLAQRTQ ST EIE +I  LQ+    ++  +  S  + + T      A ++LV I  S  
Sbjct: 555 SLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIG 614

Query: 512 EIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNS 571
            I +++  I+AA E+Q  V++EI+ ++ +++ ++ +   A +Q     V+L R   DL S
Sbjct: 615 TIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQS 674

Query: 572 AIAHIR 577
            +A  +
Sbjct: 675 MVARFK 680