Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  204 bits (519), Expect = 9e-57
 Identities = 129/356 (36%), Positives = 203/356 (57%), Gaps = 4/356 (1%)

Query: 210 TAQQFNQAAEQVKSTVLIGNISLVVVA-IIAIIGYVVVNRKIVTPIDRMASVLQRADDNS 268
           T Q  ++ A+  KS  +I  I+   +A ++ I+   V+ R+I TP+     V++R   + 
Sbjct: 272 TRQNKSRDADSAKSVQMI--IAATALAMVLGILAAWVITRQITTPLQETLEVVERVA-SG 328

Query: 269 DLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMS 328
           DL+  +     DEL  +  TI ++  S    +  I      I+S ++ + ++T+Q     
Sbjct: 329 DLSRNLNVDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGV 388

Query: 329 SQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLD 388
           + Q  E +  ATAM EMT+ +  V+++   A E A +A+++A + ++V  + I +   L 
Sbjct: 389 NSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLA 448

Query: 389 GEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 448
                +SE +  L  ES+ +G+VLDVIK++AEQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 449 SAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVAD 508

Query: 449 EVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQG 508
           EVRSLAQRTQ+ST EIE +I+ LQ   + +T  +  S +   S+      A  SL  I  
Sbjct: 509 EVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITK 568

Query: 509 SAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQR 564
           +   I  +N  IAAA EEQ   ++EI+ ++  ++ +S + + A ++     V+L R
Sbjct: 569 TVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELAR 624