Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  213 bits (541), Expect = 2e-59
 Identities = 145/493 (29%), Positives = 253/493 (51%), Gaps = 18/493 (3%)

Query: 93  ESYHTIYWDLVLQYGQKPKPDGQTIALQQ------MMKDLGFSDREFALLKEAQNNSDAL 146
           E+ H +  + +L+   KP+   Q + L++      + +D G+ D+    L+   +  D  
Sbjct: 137 EAVHNV--ETLLKEHNKPELAVQMLQLRRNEKDFMLRRDAGYLDKFQQTLRSFDSTLDGS 194

Query: 147 VNMEVKAMNAVKGLFPDASGNYTVKGEPDVNMAVQLLHSEEYHREKA--KIMAPIDRFFQ 204
            ++     + ++ L  D   N+    E  VN   +    +E  +  A   ++   ++  Q
Sbjct: 195 -DLSPDVADEIRRLMKDYQMNF----EALVNKEKEFGLGKEDGKMGALRSVIDQSEQATQ 249

Query: 205 ELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRA 264
           EL      + +   E+  S  +   +  V+  ++AI+ ++++ R I+TPI+ +  V+   
Sbjct: 250 ELRELALHEIHD--EEGDSVAMATTLFAVIAVLVAIVTFMII-RAIITPINNINQVISHV 306

Query: 265 DDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQN 324
             + +LTLR + +  DE+A IG+  N+++ S+ + I ++N   + ++     + +   Q 
Sbjct: 307 GKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESCQELSANATQA 366

Query: 325 MKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREF 384
                +Q  E +M ATA+ EM + +  ++++T +A E A      A   +Q  E+TI + 
Sbjct: 367 SDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKI 426

Query: 385 ADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFA 444
             L  +   ++ ++ +L  +S  +G+VLDVI+ IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 427 QSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFA 486

Query: 445 VVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLV 504
           VVADEVRSLA RTQEST EI  +I  LQ +     + +  S  +   +      A   L 
Sbjct: 487 VVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLA 546

Query: 505 AIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQR 564
            I      I  ++T IAAA EEQ +V+ E++ N+  I+ ++ E + A         D++ 
Sbjct: 547 QINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRE 606

Query: 565 NVDDLNSAIAHIR 577
             + L  A++  R
Sbjct: 607 RAEYLQRAVSQFR 619