Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  232 bits (592), Expect = 3e-65
 Identities = 143/374 (38%), Positives = 209/374 (55%), Gaps = 8/374 (2%)

Query: 206 LETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVV-VNRKIVTPIDRMASVLQRA 264
           L+   A    +  E + S+ L   I L V A++    + V VNR ++TP+  +   L++ 
Sbjct: 168 LQIHIADLEREQVETLHSSSLKWFIGLAVFAVLITSFFGVWVNRGVMTPVTEIRQKLRQI 227

Query: 265 DDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQN 324
            + SD+T+      DDEL  I + +N V+      +  I +   T+   +D +   T Q 
Sbjct: 228 REKSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQA 287

Query: 325 MKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREF 384
                +Q  E E  ATAM EMT+A++ V+QS+N A E A +A++ A     + +++I   
Sbjct: 288 NDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSM 347

Query: 385 ADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFA 444
           + L  + Q T+ +I +LATES N+G VLDVIK+IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 348 SVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFA 407

Query: 445 VVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLV 504
           VVADEVR+LAQRT EST EIE+MI  LQ+  + +  ++     ++ +   +   A  +L 
Sbjct: 408 VVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQ 467

Query: 505 AIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQR 564
            I  S   I +LNT IA A +EQ  V++ I+ ++  I  ++ E   A         DL  
Sbjct: 468 DIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAAN-------DLSE 520

Query: 565 NVDDLNSAIAHIRT 578
            V  L     H+RT
Sbjct: 521 AVHQLAQLAGHMRT 534