Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  184 bits (468), Expect = 7e-51
 Identities = 127/361 (35%), Positives = 188/361 (52%), Gaps = 7/361 (1%)

Query: 194 KIMAPIDRFFQELETRTAQ---QFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKI 250
           K+ A +  + + +E +  +      Q +E    TV++  I+ +++AI   I  V   R+ 
Sbjct: 265 KVAAVLQEYNKAIEQQQGELGLYAQQKSENAIDTVVVVAIAAMLMAIWLAITVVRAIRRP 324

Query: 251 VTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTI 310
           V    R  + + R     +L      +    +      +N  L      +S++N  + T+
Sbjct: 325 VGGEPREIASIAREIAGGNLGQNFLREGSTGIYAAMAEMNDNLRRI---VSELNDASRTL 381

Query: 311 SSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEA 370
              S  +  +T+++ K S  Q  +L   A+AM+EMT  +  ++++   A E A  A+  A
Sbjct: 382 GDSSSGMLGVTEESRKNSESQADQLAHTASAMQEMTHTVDDIARNAQRASEMASEADHHA 441

Query: 371 NNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAA 430
                V E T R    L       S II+ L  E+ NVG++LDVI+ IAEQTNLLALNAA
Sbjct: 442 QEGMGVVEDTRRSIMVLVDNITDVSGIIENLEKETENVGSILDVIRGIAEQTNLLALNAA 501

Query: 431 IEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQ 490
           IEAARAGEQGRGFAVVADEVR+LA RTQ ST EI+ +I  LQ ++  S +++RV+  +  
Sbjct: 502 IEAARAGEQGRGFAVVADEVRNLASRTQNSTEEIQALIGRLQAESRRSVESMRVNVTEAT 561

Query: 491 STRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNL 550
            T      A  +L AI  S   I  +N  IA A EEQ TV   I+ ++  I  L+  MN 
Sbjct: 562 QTSEKANKAIAALGAIADSVMAIRDMNHQIAVAAEEQATVVGTINVSVEEISGLA-RMNA 620

Query: 551 A 551
           A
Sbjct: 621 A 621