Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  188 bits (478), Expect = 4e-52
 Identities = 124/368 (33%), Positives = 201/368 (54%), Gaps = 19/368 (5%)

Query: 194 KIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGN-------ISLVVVAIIAIIGYVVV 246
           +++ P+ +  +    +T +     A++V S  LI +         ++++ I+A I  VV 
Sbjct: 153 EVVMPLFKALRGHYDKTGEWVKNKADEVTSEALIASQRGINLLFGIIILVILASIVSVVY 212

Query: 247 NRKIVTP----IDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISK 302
             ++VT     +D M + +  +D   DL  R+++   DEL+++ RT N ++      I  
Sbjct: 213 GPRLVTSRVEQLDTMIAAI--SDGEGDLRGRLDDSGRDELSLLARTFNGLMMKLQQLIGT 270

Query: 303 INQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMA--- 359
           I     ++ +    +     ++ K+S++Q+  LE  ATA+ +++ A+  V+ S+  A   
Sbjct: 271 IKSDAVSLDARVTGLNHSAKESEKISTEQNANLEQIATAVHQLSHAVHEVASSSQNALSD 330

Query: 360 EEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIA 419
            E+A +  KE+N    V  +++     L G     SE+IQ LA+ES  +  VLDVI+ IA
Sbjct: 331 TEHANNLIKESN---AVVGQSVERVQQLAGVVSHASEVIQNLASESKQIVTVLDVIRGIA 387

Query: 420 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMST 479
           EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ+ST +I+ M++ L+     + 
Sbjct: 388 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEDIQRMVAGLESGVSEAV 447

Query: 480 KTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLS 539
             I     ++ S     G   ++L  +  +      L   IA ATE+Q  V DE++ N+S
Sbjct: 448 SAIDSGTRQVDSVVDASGSITKALAEVDEAVSRTKDLIYLIATATEQQSKVVDEVNQNIS 507

Query: 540 TIKTLSGE 547
           ++  LS E
Sbjct: 508 SLNLLSQE 515