Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (543), Expect = 1e-59
 Identities = 155/513 (30%), Positives = 256/513 (49%), Gaps = 33/513 (6%)

Query: 91  RPESYHTIYWDLVLQYGQKPKPDGQTIALQQ-------MMKDLGFSDREFALLKEAQNNS 143
           R ES      +L  Q G  PK DG   AL+        ++K+    +    +L+  +N  
Sbjct: 108 RYESIFAEIAELQKQIGLHPK-DGLYGALRSAVHNVETLVKEKNEPELMVTMLQLRRNEK 166

Query: 144 DALVNMEVKAMNAVKG----LFPDASG---NYTVKGEPDV-------NMAVQLLHSEEYH 189
           D ++   +  ++  KG    L    SG   + +VKGE +        N    +   +E  
Sbjct: 167 DFMLRRAMSYLDKFKGNLALLRQQVSGAMLSDSVKGELNALIDDYEKNFKALVSKEQELG 226

Query: 190 REK-----AKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYV 244
            +K     A +   I    + L    AQ  +  ++   +TV I  +  +++ ++ I   +
Sbjct: 227 LDKDSGSMASLRDSISSAEKSLVQLKAQSMDAISDAESATVTISIVVFILITLVLIGFTL 286

Query: 245 VVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKIN 304
            + R I+ P+ R++  + R +   DLTLR + K DDE+  I R  N ++ S+ S I    
Sbjct: 287 AIIRSIMEPVQRISDAISRIEATKDLTLRCDTKVDDEIGQIARHFNSMVESFQSLI---R 343

Query: 305 QVNHTISSISDTIRSITDQNMKMSS---QQDQELEMAATAMEEMTSALSSVSQSTNMAEE 361
           +V  ++  ++ + + +++ +M+ S    +Q  E +M ATA+ EM + +  ++ +T +A E
Sbjct: 344 EVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEIASNTELAAE 403

Query: 362 YAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQ 421
            AG+    A   +   E TI +   L  +   +++++ +L  +S  +G+VLDVI+ IAEQ
Sbjct: 404 RAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVLDVIRGIAEQ 463

Query: 422 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKT 481
           TNLLALNAAIEAARAGEQGRGFAVVADEVRSLA RTQEST EI  +I  LQ +     + 
Sbjct: 464 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQL 523

Query: 482 IRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTI 541
           +  +  +   +      A   L  I      I  ++T IAAA EEQ  V+ E++ N+  I
Sbjct: 524 MEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVASEVNKNVVVI 583

Query: 542 KTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIA 574
           + ++ E   A  +      D++     L  A++
Sbjct: 584 RDIAAESAQAADENAKASDDVKARTQVLYQAVS 616