Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  236 bits (603), Expect = 1e-66
 Identities = 158/459 (34%), Positives = 243/459 (52%), Gaps = 20/459 (4%)

Query: 136 LKEAQNNSDA---------LVNMEVKAMNAVKGLFPDASGNYT----VKGEPDVNMAVQL 182
           L+EA NN D+         L   E + ++  + LF  A+   T    + G    N+A QL
Sbjct: 85  LQEASNNIDSKWRQYVATELTTDEKRLVDEAERLFVPANQRITHLEQLLGGKSGNIAGQL 144

Query: 183 LHSEEYHREKAKIMAPIDRFFQELETR----TAQQFNQAAEQVKSTVLIGNISLVVVAII 238
               E      +++ PI     EL +       ++ ++ AE  +S++ +  +  +V AI 
Sbjct: 145 ---REEIIPLYRVIDPISGTIAELISLQLKVAGEEKDRVAEIYESSISLFILITLVAAIA 201

Query: 239 AIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGS 298
           +I+  V +NR ++ PI+ + + L     +SDLT+  E+ + DEL +I   +N V      
Sbjct: 202 SIVLGVWINRSVMKPINHIRTQLHTIQQDSDLTVTFEQLNKDELGLISTGLNDVFRHLRG 261

Query: 299 TISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNM 358
            +  + +  +++S  +  +   T  +     QQ  E E  ATAM EMT+ ++ V+QST  
Sbjct: 262 ILKGVAEAANSVSDSALALNEFTQISNARIQQQQAETEQTATAMNEMTATVNEVAQSTTA 321

Query: 359 AEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAI 418
           A + A +A++ A N   + + +I     L  + Q TSE+I  L+ ES ++G+VL VIK I
Sbjct: 322 AADSARNADRFAANGNDIVQLSISSMQALSMQIQSTSEVITHLSHESQHIGSVLSVIKGI 381

Query: 419 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMS 478
           AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQE+T EIETMI  LQ     +
Sbjct: 382 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEATQEIETMIETLQSGVNEA 441

Query: 479 TKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNL 538
              + V   ++         A E+L  I  S   I ++NT IA A EEQ +V++ I+ ++
Sbjct: 442 VTAMDVGIKQVDDANQQTNKAGEALQEIVASVDNITEMNTHIATAAEEQSSVAESINRSI 501

Query: 539 STIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
             I  ++ +   +  +LG  +  L    D +   +   R
Sbjct: 502 IAISDIASQSTESALELGHSIAQLTSLADSMRQQVTTFR 540