Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  190 bits (483), Expect = 1e-52
 Identities = 116/319 (36%), Positives = 177/319 (55%), Gaps = 2/319 (0%)

Query: 231 SLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVEEKSDDELAVIGRTI 289
           +LV+VAI A++  V   R +V PI  M   L+  A    DLT R++ +  DE+A++GR  
Sbjct: 207 ALVLVAITAVVMLVAAQR-MVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAF 265

Query: 290 NKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSAL 349
           N+ +      I  + +    + S +D I S T    +     + E +   TA+ EM++  
Sbjct: 266 NQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSATA 325

Query: 350 SSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVG 409
           S V+ ST    E   +A ++  N+++  + ++ E + L  E    +  I  L  +S  + 
Sbjct: 326 SEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKIN 385

Query: 410 NVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMIS 469
           +VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA RTQ ST EI  M+S
Sbjct: 386 SVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLS 445

Query: 470 MLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLT 529
            L     ++  ++  S      +  +    ++SL A+  +   I+ ++T IA A  EQ +
Sbjct: 446 ELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSS 505

Query: 530 VSDEISSNLSTIKTLSGEM 548
           V++EI+ N+  I+ +  E+
Sbjct: 506 VTEEINRNVFAIQEIVNEL 524