Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  197 bits (502), Expect = 8e-55
 Identities = 117/321 (36%), Positives = 183/321 (57%), Gaps = 3/321 (0%)

Query: 225 VLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAV 284
           ++IG I+L++   IA      + R I    D +  +   A+   DLT R+E KS DE+A 
Sbjct: 284 IMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDI---AEGEGDLTRRIEVKSKDEMAQ 340

Query: 285 IGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEE 344
           + +  N+      +T+++++     +++ ++ + +IT +  +M+++Q  E E  ATAM E
Sbjct: 341 LAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMNE 400

Query: 345 MTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATE 404
           M + +  V+ +   A + A  A +     K + EK I   + L  E  + +  I +L   
Sbjct: 401 MAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAANAINELERN 460

Query: 405 SNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEI 464
           +  + +VL VI+ IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST EI
Sbjct: 461 TTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEI 520

Query: 465 ETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAAT 524
           + MI  LQ+ A+ +  ++  S    QS    +  A  +L AI  +   I ++N  IA+A 
Sbjct: 521 QQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAA 580

Query: 525 EEQLTVSDEISSNLSTIKTLS 545
            EQ  VS EI+ N++ I  ++
Sbjct: 581 NEQCAVSAEINKNVNNINDIA 601