Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  190 bits (483), Expect = 1e-52
 Identities = 122/323 (37%), Positives = 181/323 (56%), Gaps = 8/323 (2%)

Query: 230 ISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVEEKSDDELAVIGRT 288
           I+LV+  I A I  V  +R +V PI  MA  L   A    DLT R+  K +DE+A +G+ 
Sbjct: 206 IALVLTGITAFIIMVAAHRMVV-PIKNMADSLNDIAKGEGDLTKRLSVKGEDEIAQLGQA 264

Query: 289 INKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQ---QDQELEMAATAMEEM 345
            N  +    + I  +      + S ++ I    DQ   MSSQ    + E +   TA+ EM
Sbjct: 265 FNLFVDKLQTIIGDVANATAKVKSAANAIH---DQTKVMSSQLLSHNNETDQVVTAITEM 321

Query: 346 TSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATES 405
           +S  S V+Q+T    E   +A  +  N+++  + ++ E A L  +    +  I+ L+ +S
Sbjct: 322 SSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSIKSLSEQS 381

Query: 406 NNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIE 465
             + +VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST EI 
Sbjct: 382 QKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEIN 441

Query: 466 TMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATE 525
            M+S L +   ++ KT+  S      +  +    +ESL ++  +   I+ ++T IA A  
Sbjct: 442 EMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMSTQIATAAT 501

Query: 526 EQLTVSDEISSNLSTIKTLSGEM 548
           EQ +V++EI+ N+  I+ +  E+
Sbjct: 502 EQSSVTEEINRNVYAIQEIVNEL 524