Pairwise Alignments

Query, 379 a.a., CdaR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., transcriptional regulator, CdaR family from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (424), Expect = 3e-46
 Identities = 125/377 (33%), Positives = 189/377 (50%), Gaps = 26/377 (6%)

Query: 3   LDSQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKNRIGQVHDGAILALKHGDSVELTA 62
           LD  LAQ IVDR MAI+ YN+NVM+  G+IIGSG+  R+   H+GA   L +   VE+ +
Sbjct: 4   LDRALAQDIVDRAMAILPYNVNVMDYLGIIIGSGDAERLCTRHEGAQRVLANRQVVEIDS 63

Query: 63  ESCVALKGVKPGINMVLRNQQQVVGIVGITGEPKDIRDFANLVKMSAEMIIEQAALVEQL 122
            +   L GVKPG+N+ L    Q+VG++GITGEP ++R +  LVKM+AEM++EQ      L
Sbjct: 64  LAASQLGGVKPGVNLPLMLDHQLVGVLGITGEPDEVRVYGELVKMTAEMLMEQRRQQADL 123

Query: 123 QWDRRHREEFISAWIHNTLSAAELDAWAARLSIDLSKPRVAVVIAFRQPKSGQSLDQIRQ 182
           QW  +  E+ ++  +      + +D  A +L +     R  V++ F +     S     Q
Sbjct: 124 QWRAQRSEDLLARLLLPDCPDSLVDE-ARQLGLQPHIARQVVLLQFAEEGLAAS-----Q 177

Query: 183 VVELLEHPERDNLVAVVSMQEIVVLKPCRTPEHWTSEYESLRIDKLMARLKAYDITGYDI 242
           V + L     D+          V+ +P  T  +W       R D L+  LK +D   + +
Sbjct: 178 VAKWLGTRYADSW--------CVLREP--TLLYWCRATGKERDDALL--LKQFDEHHWPV 225

Query: 243 ALGQLFINPNA----IHLSYQSAKQVLRIGQVRQPEKQKHLYEELRLPVLLLPLNEGWQG 298
            L    +  +A    +  +  +A+ +L   +  +P ++    E  RLPVL       W  
Sbjct: 226 -LRMATVAQSADLPTLRQACAAARDLLDYARQARPAQRLLRLEAYRLPVLFWRYRHDWLA 284

Query: 299 EQWRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITGI 358
           E     M+ L       QL+ TL   F  +G    CA+ L IHRN+LRYRLEKI E+TG 
Sbjct: 285 EHVAEPMERLHAH---AQLLDTLCKWFEYSGESQACAEALGIHRNSLRYRLEKIGELTGC 341

Query: 359 ETNSLLGLAELYIAYQL 375
           +      L +LY+  Q+
Sbjct: 342 DPYKTDDLLQLYLGAQM 358