Pairwise Alignments

Query, 450 a.a., permease from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., gluconate transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  680 bits (1755), Expect = 0.0
 Identities = 355/452 (78%), Positives = 400/452 (88%), Gaps = 2/452 (0%)

Query: 1   MSLILILLAVIVFIVLATTKFKVHPFLALLLAAFLGAFAYGLPADTIAKTITTGFGGILG 60
           M+L+LIL+ VI FIV+AT+KFK+HPFL L+LAAF+ AFAYGLP+  IAKTITTGFG ILG
Sbjct: 1   MNLVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGDIAKTITTGFGNILG 60

Query: 61  YIGLVIVLGTIIGVILEKSGAAITMADTVIKLLGERFPTLTMSIIGYIVSIPVFCDSGFV 120
           YIGLVIVLGTIIG+ILEKSGAAITMAD VIK+LG+RFPTLTMSIIGY+VSIPVFCDSGFV
Sbjct: 61  YIGLVIVLGTIIGIILEKSGAAITMADVVIKVLGKRFPTLTMSIIGYLVSIPVFCDSGFV 120

Query: 121 ILNSLKESLAKRLATSSVAMSVALATGLYATHTFVPPTPGPIAAAGNLGLESQLGLVIAI 180
           ILNSLK+S+A R+  SSV+MSVALATGLYATHTFVPPTPGPIAAAGNLGLES LGLVI +
Sbjct: 121 ILNSLKQSMANRMKVSSVSMSVALATGLYATHTFVPPTPGPIAAAGNLGLESNLGLVIGV 180

Query: 181 GLFVAAVAAIAGMLWANRFQAVEADIIDSQE--SPKKDWQALKASYGQLPSASQAFAPIF 238
           GL VAAVAA+AGM WANRF +VE D   ++E  +   D++ALK SYG LPS  +AFAPIF
Sbjct: 181 GLLVAAVAALAGMFWANRFASVEPDGEGAEELKAQAADFEALKQSYGTLPSPLKAFAPIF 240

Query: 239 VPILLICFGSIAKFPSFPFGQGMLFEVLGFLGQPLTALLIGLLLAVRLLKSADKVAEFGE 298
           VPILLIC GSIA FPS P G+  LF +L FLGQP+ ALLIGL L++ LLKS +K+AEF E
Sbjct: 241 VPILLICLGSIANFPSAPLGKEGLFSLLVFLGQPVNALLIGLFLSLLLLKSDNKIAEFSE 300

Query: 299 RISQGITAAAPILLITGAGGAFGAVLKATPLGDYLGTTLSALGVGIFMPFIVAAALKSAQ 358
           RISQG+ AAAPI+LITGAGGAFGAVLKATP+GD+LG++LSALGVGIFMPFIVAAALKSAQ
Sbjct: 301 RISQGLVAAAPIILITGAGGAFGAVLKATPIGDFLGSSLSALGVGIFMPFIVAAALKSAQ 360

Query: 359 GSSTVALVTTSALVAPLLGQLGLDSEMGRALTVMAIGAGAMTVSHANDSFFWVVSQFSRM 418
           GSSTVALV TSALVAP+LG +GL S+MGR LTVMAIGAGAMTVSHANDSFFWVV+QFSRM
Sbjct: 361 GSSTVALVATSALVAPMLGDIGLGSDMGRVLTVMAIGAGAMTVSHANDSFFWVVTQFSRM 420

Query: 419 SVGLAYRAQTMATLVQGGTAMAVVYVLSLVLL 450
           SV  AY+AQTMATL+QG TAM  VYVLSLVLL
Sbjct: 421 SVKQAYKAQTMATLIQGVTAMLTVYVLSLVLL 452