Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (267), Expect = 3e-28
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 7/265 (2%)

Query: 1   MLKWLR-----VLLLCTFLVGCATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSL 55
           M +WL      + LL T        L Y NLD  +     D++D+  +QK    + +   
Sbjct: 1   MPRWLTRTAMFIALLLTLTACSRIGLAYRNLDLIIPWTLNDYLDIRGEQKDWFNERLKDH 60

Query: 56  QSWHRAQELPDYLAMMDELSALSLPD-VTVEQVAQFQEKMRFYYQRLVIKLLPDVSRLAA 114
            +WH   +LPDYL  +D L  +   D VT E + Q  ++ +        ++ P    L  
Sbjct: 61  LTWHCTTQLPDYLDWLDRLKTMVKTDQVTDEALQQRTQEAKAAIAETARQITPSAIELLQ 120

Query: 115 TLSEEQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELV 174
            L+++Q +    AF+K   K  ++++K    +      +R+  RL+DWLGPLN++Q + V
Sbjct: 121 GLNDDQVDDMDAAFVKDQRKRQQQYLKPTLQQQIQERSDRMVKRLDDWLGPLNEAQHQRV 180

Query: 175 KVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAK 234
             WS  +      WI  +   + Q    + QR  P+ F  ++E LL+N E  +    +  
Sbjct: 181 MAWSTALGDQNQQWIANRAHWQNQFSEAVAQRHSPD-FPKRIEQLLVNRESLWTPAYREA 239

Query: 235 LSYNRELGQRYVVQILQNSSDKQQQ 259
            S      +  +V ++  S+  Q++
Sbjct: 240 FSKTEAQARSLLVDLMAESTPPQRE 264



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 32/144 (22%)

Query: 146 ELRDFYQERITDRLEDWLGPLNKSQQELVKVWSDNIQ-PTANDWIGFQTTM--REQVRT- 201
           E +D++ ER+ D L                 W    Q P   DW+    TM   +QV   
Sbjct: 48  EQKDWFNERLKDHL----------------TWHCTTQLPDYLDWLDRLKTMVKTDQVTDE 91

Query: 202 LLQQRTQP----------EAFQTQLESLL-LNPEQHYGMILKAKLSYNRELGQRYVVQIL 250
            LQQRTQ           +   + +E L  LN +Q   M   A +   R+  Q+Y+   L
Sbjct: 92  ALQQRTQEAKAAIAETARQITPSAIELLQGLNDDQVDDMDA-AFVKDQRKRQQQYLKPTL 150

Query: 251 QNSSDKQQQHWRDELADWRGRVSD 274
           Q    ++       L DW G +++
Sbjct: 151 QQQIQERSDRMVKRLDDWLGPLNE 174