Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2C3

 Score =  103 bits (256), Expect = 6e-27
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 7/281 (2%)

Query: 1   MLKWLR-----VLLLCTFLVGCATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSL 55
           M +WL      + LL T        L Y NLD  +     D++++  +QK    + +   
Sbjct: 1   MSRWLTRTALFIALLLTLTACSRVGLAYRNLDLIIPWTLNDYLEIKGEQKDWFNERLKEH 60

Query: 56  QSWHRAQELPDYLAMMDELSAL-SLPDVTVEQVAQFQEKMRFYYQRLVIKLLPDVSRLAA 114
            +WH   +LP Y+  +D L  +     VT E + Q  ++ +         + P    L  
Sbjct: 61  LTWHCTTQLPGYVDWLDRLKTMVQTNQVTDEALQQRTQEAKAAIAETAQAITPSAIELLQ 120

Query: 115 TLSEEQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELV 174
            LS+EQ +    +F+K   K  ++++K    E      ER+  RL DWLGPLN +Q++ V
Sbjct: 121 GLSDEQVDDMDASFVKDQRKRQQQYLKPTLQEQIQERSERMVKRLNDWLGPLNDAQRQRV 180

Query: 175 KVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAK 234
             WS  +      WI  +   + Q    + QR  P+ F  ++E LL+N E  +    +  
Sbjct: 181 VAWSTALGDQNQQWIANRAHWQNQFSEAVAQRHSPD-FPKRIEQLLVNRESLWTPAYREA 239

Query: 235 LSYNRELGQRYVVQILQNSSDKQQQHWRDELADWRGRVSDL 275
            S      +  +V ++  S+  Q++    ++   +   +DL
Sbjct: 240 FSKTEAQARSLLVDLMAESTPPQRERLLKKIDGMKKDFTDL 280