Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  101 bits (251), Expect = 2e-26
 Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 15/285 (5%)

Query: 1   MLKWLR----VLLLCTFLVGC-ATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSL 55
           M +WL+     L LC  L  C    L Y NLD  +     D++D+N++QK  + + +   
Sbjct: 1   MSRWLKHLALFLTLCLSLPACNRVSLAYRNLDIIIPWTLNDYLDMNSEQKGWLSERLKEH 60

Query: 56  QSWHRAQELPDYLAMMDELSALSLPDVTVEQVAQFQEKMRFYYQRLVI-----KLLPDVS 110
            SWH + ++P Y+  +D L  +    V   QV     + R    +  I     ++ P   
Sbjct: 61  LSWHCSTQIPGYVDWLDRLQQM----VETNQVTDAALQARILEAKQAIAQTAREITPSAV 116

Query: 111 RLAATLSEEQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQ 170
            L   L+++Q  +  QAF K      +K++K   ++      ER+  RL DWLGPLN  Q
Sbjct: 117 ELLQGLNDQQVNEMKQAFAKDQRVHQEKYLKAPLAQQIKHRIERMDKRLGDWLGPLNTIQ 176

Query: 171 QELVKVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMI 230
            + V  W++ +      W+  +   +      ++QR   + F  ++E+LL++ E  +   
Sbjct: 177 AQRVVAWANALGEQNQQWLANRAHWQALFSAAVEQRHSSD-FAQRIETLLVDRETLWTPA 235

Query: 231 LKAKLSYNRELGQRYVVQILQNSSDKQQQHWRDELADWRGRVSDL 275
            +   S      +  +V ++ +S+  Q+QH   ++   R   S L
Sbjct: 236 YRQAYSNTEAQARSLIVDLMADSTADQRQHLLKKIDKMRSDFSAL 280