Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N1B4

 Score =  105 bits (263), Expect = 9e-28
 Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 14/282 (4%)

Query: 2   LKWLRVLLLCTFLVGCATK--LVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSLQSWH 59
           LK + V+L  +  V   ++  L Y NLD  +     D++++N +QK    + +    SWH
Sbjct: 5   LKQIGVILTLSLTVAACSRVGLAYRNLDVIIPWTLSDYLEMNHEQKDWFNERLKEHLSWH 64

Query: 60  RAQELPDYLAMMDELSALSLPDVTVEQVAQFQEKMRFYYQRLVI-----KLLPDVSRLAA 114
              +LP YL  +D L A+    V   Q+     + R +  +  I     ++ P    L  
Sbjct: 65  CTTQLPGYLDWLDRLQAM----VEANQITDAALQTRTHEAKQAIADTAREITPSAIELLQ 120

Query: 115 TLSEEQTEQFMQAFIKRHDKFAKKFIKMD-ESELRDFYQERITDRLEDWLGPLNKSQQEL 173
            L ++Q  +   AF K   K  + ++K   E ++R+   +R+  RL DWLGPLN SQQ+ 
Sbjct: 121 GLDDKQVAEMNDAFAKDQRKRQEAYLKPSLEQQIRE-RSKRMEKRLNDWLGPLNPSQQQR 179

Query: 174 VKVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKA 233
           V  WS+ +      WI  +   ++Q    + QR  PE F  ++E+LL+N E  +    + 
Sbjct: 180 VVAWSNALGDQNRQWIANRVHWQQQFSAAVAQRQSPE-FPQRIETLLVNRESLWTPAYRE 238

Query: 234 KLSYNRELGQRYVVQILQNSSDKQQQHWRDELADWRGRVSDL 275
             +      +  +V ++  S+  Q++    ++   R   +DL
Sbjct: 239 AYANTEAQARALLVDVMAESTPVQRERLLQKIEGVRKDFADL 280