Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (263), Expect = 8e-28
 Identities = 69/265 (26%), Positives = 126/265 (47%), Gaps = 10/265 (3%)

Query: 1   MLKWLRVLLLCTFLV-GCATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSLQSWH 59
           M + L V+ L  FL+ GC+TK+ Y+ LDW +    +D+VDLN  Q+   +  +     WH
Sbjct: 1   MKRALAVMGLALFLLAGCSTKMSYYFLDWAIEWELDDYVDLNRDQQKQFDAVLDEFIDWH 60

Query: 60  RAQELPDYLAMMDEL-----SALSLPDVTVEQVAQFQEKMRFYYQRLVIKLLPDVSRLAA 114
           R +ELP Y+A ++ +     S    P    E+V   Q      ++ +   +LP    +  
Sbjct: 61  RREELPRYVAQLESIKQQMQSGTLTPAAWAEEVNYAQSHWFRLFEHVFEGILP----IVQ 116

Query: 115 TLSEEQTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELV 174
           + S+EQ    ++   +   K   ++    + EL     ER+T+R E W+G L+  Q+ ++
Sbjct: 117 SFSDEQVAGIIKQLREEEAKLVAEYAGKTQEELIADSDERLTERAEKWIGKLSDKQKAMI 176

Query: 175 KVWSDNIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAK 234
              + +   T + W+ ++     Q  T L QR      +++L+ L+  P+       +  
Sbjct: 177 HASNTSRLSTLDMWLEYRHEWLRQFETALNQRADTALLRSRLQLLMTAPQTLKSEKHQQA 236

Query: 235 LSYNRELGQRYVVQILQNSSDKQQQ 259
           +  N E   R V+ I ++ SDKQ++
Sbjct: 237 VRENSENFGRLVMDIYRDLSDKQRK 261