Pairwise Alignments

Query, 278 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (251), Expect = 2e-26
 Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 1/266 (0%)

Query: 1   MLKWLRVLLLCTFLVGCATKLVYHNLDWFVIDYAEDFVDLNTQQKTLIEQTMPSLQSWHR 60
           M K + +L++   L  C+TK  YH LDW +    +D+V LN  Q+  +++ +     WH+
Sbjct: 1   MKKTMLLLVMLLGLSACSTKFSYHFLDWAIGWELDDYVTLNKTQQKSMDKLIEKFVLWHQ 60

Query: 61  AQELPDYLAMMDELSALSLPDVTVEQV-AQFQEKMRFYYQRLVIKLLPDVSRLAATLSEE 119
           ++EL  Y+A + E+  L   +     + A+     + ++ RL    LPD+  +  +L+E 
Sbjct: 61  SEELTHYVAQLTEVEHLIQTNTLTPALWAEHVTLAKRHWFRLFEFALPDMLPIIGSLTEA 120

Query: 120 QTEQFMQAFIKRHDKFAKKFIKMDESELRDFYQERITDRLEDWLGPLNKSQQELVKVWSD 179
           Q +Q +    K   +  K+F      +L+    + + ++  DWLG ++  Q++L+  ++ 
Sbjct: 121 QVKQILAQSRKDEQELIKEFAGKTPEQLQQDADDNLNEQFNDWLGSVSDEQKQLIHQYNQ 180

Query: 180 NIQPTANDWIGFQTTMREQVRTLLQQRTQPEAFQTQLESLLLNPEQHYGMILKAKLSYNR 239
               T + W+ ++     Q    L QR+       +L  L+  P++      +A L  N 
Sbjct: 181 QRLSTLDMWLDYRHEWLRQFEIALGQRSDIPLLTERLTLLMTQPDELKSEKHRAILRQNT 240

Query: 240 ELGQRYVVQILQNSSDKQQQHWRDEL 265
           E     ++ I  + S KQ +H+  +L
Sbjct: 241 EAFGALLLAINASLSPKQSKHFYKKL 266