Pairwise Alignments

Query, 470 a.a., PepSY domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., PepSY-associated TM helix domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 98/403 (24%), Positives = 166/403 (41%), Gaps = 64/403 (15%)

Query: 25  WHFYAGLFVVPFMLM---LALTGLVMLFDDEIEQARYAEVLNVTP-QAQVMPVSQQLAAV 80
           W    G   +P  ++   + LTG V +   E+            P +    PV + +  V
Sbjct: 9   WFMLHGWVSLPIWILFSFICLTGTVAVLSHELTWLTNPAARATNPNELPAKPVDELMLVV 68

Query: 81  QKAYPEAQVTQFIPAHQPDLANRFSVLFSDGSTQFVTVSPYSAVVLGAIDRSESWYEWAN 140
           +KAYP AQV   +   +P L N  +   +D       V+ Y+  +   I+   ++  +  
Sbjct: 69  EKAYPNAQVMGAMTL-EPYLVNAITFTDADKPYAIAYVNQYTGEIQ-QINEGLTFIGFMR 126

Query: 141 SIHGTLLIGDW------GDYLIEVAASLGMILLVSGIYLWLPLDNARKAGFLKIRVGSGA 194
           S+HG LL   W      G YL+   A L +  L++G+ ++     +  A   K+R+  G 
Sbjct: 127 SLHGWLLF-PWQSGYSVGYYLVCSMALLMLASLITGLIVYKRFWRSFFAP--KLRLTQGK 183

Query: 195 RIFWRDLHANLGGMLSLVLLFFLISGLSWAGIWGGKLVQAWNTFPTYYTWGEKPQSVLTH 254
           +    DLH  L G+ S+    + I+ +S  G+W   LVQA                +  H
Sbjct: 184 KTLLSDLH-KLSGVWSI----WFIAIMSLTGLW--YLVQA----------------IFWH 220

Query: 255 ADLNHGSEKEMPWNLEQTPVPQSHHHGGEHEMVAVNPQFGIDQVIAQAKALGFTQYRVAF 314
           AD++  S   M    EQ P+ Q+    G+ ++ + N  F     +A+ +   F    V  
Sbjct: 221 ADIDIESHAPMI-AAEQVPLMQA----GDTQLPSANVSFTEALSLAKQRFPDFQPSYVML 275

Query: 315 PRGETGVYTVSANTMAGDIVDPRDDRTAHFDQYS---------GALLTEVTWQDYSPFAK 365
           P  +  +Y +S +   GD +         +DQYS         G + +  + +  +    
Sbjct: 276 PEHQRDMYHLSGS---GDHI--------FYDQYSYSLSINPWTGEIASATSPETMTGMQT 324

Query: 366 AMAAGISLHQGDLS-VWNKIANVLFCLAFILISVTGVVMWWLR 407
            M     LH G L+ +W K+    F L    +S+TG +MW LR
Sbjct: 325 LMHIADPLHYGTLAGIWTKLIWFFFGLVLSGMSITGFMMWGLR 367