Pairwise Alignments

Query, 470 a.a., PepSY domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., response regulator receiver protein (RefSeq) from Shewanella sp. ANA-3

 Score = 45.1 bits (105), Expect = 6e-09
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 26  HFYAGLFVVPFMLMLALTGLVMLFDDEI----------EQARYAE-VLNVTPQ--AQVMP 72
           H   G+  +PF L+++L+ +V  F D++          E+  +A+   + TP   A +  
Sbjct: 199 HNLVGITSLPFHLVISLSVIVFAFHDQLYDGLKHMVYGEKPLFAQPAPDRTPYTLADLPK 258

Query: 73  VSQQLAAVQKAYPEAQVTQ--FIPAHQPDLANRFSVLFSDG-----STQFVTVSPYSAVV 125
           ++  LA VQ+  PE QV +  F+  + P    R  +   DG      T ++ + PYS  V
Sbjct: 259 ITTVLAKVQELAPEYQVHEMTFMNLNNPRATLRLGLYNPDGFMRGPVTDYLYMHPYSLKV 318

Query: 126 LGA-IDRSESWYEWANSI------HGTLLIGDWGDYLIEVAASLGMILLVSGIYLWLPLD 178
             + ID SE+   WA S+      H     GD G ++       G  L  SG  LWL   
Sbjct: 319 SNSTIDASENGI-WARSVAVFFGLHFGSYGGDLGRWVYFFLGLSGAFLFYSGNLLWLEKR 377

Query: 179 NARKA 183
             ++A
Sbjct: 378 RKKQA 382



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 152 GDYLIEVAASLGMILLVSGIYLWLPLDNARKAGFLKIRVGSGARIFWRDLHANLGGMLSL 211
           G Y++ VAA L  + LVSG+   LP        F  +R   G   FW D H NL G+ SL
Sbjct: 152 GVYVLGVAAFLYFLALVSGVIFLLP---TLTKSFFALRKDKGESRFWLDAH-NLVGITSL 207

Query: 212 VLLFFLISGLS 222
              F L+  LS
Sbjct: 208 P--FHLVISLS 216