Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  159 bits (401), Expect = 1e-43
 Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 3/289 (1%)

Query: 12  DLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKV 71
           +++ F  V  EGS +AAA  LG+TPSA+S++I R EQ L  +L  RTTR +  T  G+  
Sbjct: 9   EMSVFATVAQEGSLSAAARALGLTPSAVSRIIARTEQRLGTRLLLRTTRAITFTAEGE-A 67

Query: 72  YDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKL 131
           + +    + A    +E + ++   P G L V+A        + P V  F A+YP+I + L
Sbjct: 68  FLRGARRILADMDEVEEAIADQGVPRGRLLVSAALGHGRQAIVPLVAAFSARYPNIVVDL 127

Query: 132 RAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLA 191
              D  +D+     DVA R    PD  L  R +  T  V+ ASP+YL + GTP+ P DL 
Sbjct: 128 TLGDEVVDILGGQADVAVRFGHLPDSPLTARRIGDTGQVVVASPDYLQRHGTPVEPEDLL 187

Query: 192 EHDCLYLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQ 251
            H+CL       +  W F +     ++ VSG    +  +      +   GI    +F V 
Sbjct: 188 RHNCLRFNFRRAEPNWPFIRDGREFSLKVSGNIECSSGEALAQFARVGAGIARIGEFTVS 247

Query: 252 DALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEH 300
           + L  G ++ +L+ WN        I   +     MPAR+R+F+DF+LEH
Sbjct: 248 EDLQRGDLIPLLEAWN--PGDREPIHAVFVGGSAMPARVRLFVDFLLEH 294