Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (461), Expect = 1e-50
 Identities = 106/293 (36%), Positives = 167/293 (56%), Gaps = 3/293 (1%)

Query: 12  DLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKV 71
           ++  F+ VV  GSF+ AA +LG+  SA+SK I+ LEQAL VKL +RTTR+L +T AG++ 
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 72  YDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKL 131
           Y+         QQA +  +S+     G+L V+ P  F    + P +  F  QYP I L++
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 132 RAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLA 191
              D  +DL K  +D+  R+ D PD +LV  +L   + +LCASP+YLA +  P    DL 
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 192 EHDCLYLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQ 251
            H+CL+ +       W+F +  E   +   G   VN S++    + + +GI +   ++V+
Sbjct: 186 GHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLVE 245

Query: 252 DALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLSPK 304
           + LAAG +V VL ++   +  HG  A+   + ++MPARLRVFIDF+ + L+ +
Sbjct: 246 EELAAGTLVPVLSDYQAPT--HGIYALT-PERQHMPARLRVFIDFLKQALAER 295