Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (420), Expect = 7e-46
 Identities = 89/297 (29%), Positives = 162/297 (54%), Gaps = 3/297 (1%)

Query: 6   LIALLPDLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIIT 65
           ++ LL  +A F  V   GSF++AA KLG++ S +S  +  LE  L V+L +RTTR L +T
Sbjct: 1   MLELLEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLT 60

Query: 66  QAGQKVYDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYP 125
           +AGQ +Y Q   ++  A QA+    + +    G L V   ++F    + P +  F+A++P
Sbjct: 61  EAGQLLYAQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPDFMARHP 120

Query: 126 HIQLKLRAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPI 185
            ++L++   D  +D+    +D+   ++++    +V R L K   +L ASPEY+A+ G P 
Sbjct: 121 ELELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLAASPEYVAKHGYPE 180

Query: 186 HPTDLAEHDCL-YLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGI 244
            P  L +H+CL Y  E  +  +W F KG +   + VSG + V+ +    +   + LG+  
Sbjct: 181 RPEQLVDHNCLVYHGEWHEHSVWQFKKGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVY 240

Query: 245 FHDFVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHL 301
              +++++ +  G +V +L EW +   +H  +   Y + K++  ++  FIDF+ +H+
Sbjct: 241 LASYLLENEIEKGTLVPLLPEWQL--THHLPLQAVYPRRKHLAPKVSAFIDFIKDHI 295