Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (416), Expect = 2e-45
 Identities = 88/297 (29%), Positives = 164/297 (55%), Gaps = 3/297 (1%)

Query: 6   LIALLPDLATFIVVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIIT 65
           ++ LL  +A F  V   GSF+AAA +LG++ S +S  +  LE  L V+L +RTTR L +T
Sbjct: 1   MLELLEPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLT 60

Query: 66  QAGQKVYDQSLLMVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYP 125
           +AG  +Y Q   ++  A+QAI    + +    G L V   ++F    + P +  F+A++P
Sbjct: 61  EAGHLLYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIPALPSFMAKHP 120

Query: 126 HIQLKLRAADGDIDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPI 185
            ++L++   D  +D+    +D+   ++++    +V R L K   +L ASP+Y+A+ G P 
Sbjct: 121 ELELQVSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPDYIAKHGEPS 180

Query: 186 HPTDLAEHDCL-YLAETDKDHIWTFAKGRETHTVAVSGRYAVNQSQLRLTGVKNHLGIGI 244
            P  L +H+CL Y  E  +  +W F KG +   + VSG + V+ +    +   + LG+  
Sbjct: 181 RPEQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVY 240

Query: 245 FHDFVVQDALAAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHL 301
              ++++D +A G +V +L++W +   +H  +   Y + K++  ++  FI+F+ +H+
Sbjct: 241 LASYLMEDEIAKGTLVPLLKDWQL--THHLPLQAVYPRRKHLAPKVSAFIEFIKDHI 295