Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (307), Expect = 8e-33
 Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 12/291 (4%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ L  FE AAR  SF  AA EL+++P+AISH++  LE  +G++LFER+ + V L+ +G+
Sbjct: 7   LTALRGFESAARLGSFKAAAQELNVSPAAISHQVKSLEAFLGVRLFERSSQNVRLSADGE 66

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
           R++  + + L ++   +  +     +  L + + P+FA  WL+PR+  F  LYP ID++L
Sbjct: 67  RLHPYMYRALLDIQHGLQVLSPPCAAQSLVVSTTPAFASLWLIPRLGDFHRLYPEIDVRL 126

Query: 139 LTGNENISFQ-GSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNL 197
            T N+ +  Q  + ID+AI        +L  + +  E     C P + Q  +  S ++  
Sbjct: 127 HTSNDVVDLQRDASIDLAIRALFRPDPQLFEQPLLDEHFGVYCRPGW-QPPAAGSPVE-- 183

Query: 198 YNTTLLHDNQAWNYNSDADEWKTW-ANANQLENLENISRIGFDRSDLAVIAAINNAGIAM 256
                L D    +  + A +W  W A A  L  LEN     +D    A+ AAI   G+ +
Sbjct: 184 -----LIDVPWLSSANVAVDWPAWCAKAGTLGWLENARFRRYDEEQHALQAAIAGHGLVL 238

Query: 257 GRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQ-KVKLFIDWL 306
               LV   ++ GEL+   P    +   RY V  +P +  Q  V+ F +WL
Sbjct: 239 ASNVLVAEAVARGELVEYRPEVR-LAGARYTVVCVPGRERQAAVRGFSEWL 288