Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

 Score =  158 bits (400), Expect = 1e-43
 Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 6/289 (2%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ L  FE AARH SF+ AA EL++T +AISH+I +LEEE+G++LF R    + LT+EG 
Sbjct: 8   LNGLKAFESAARHMSFTKAAQELNVTQTAISHQIRRLEEELGVRLFLRLKDGLALTDEGH 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
             +  ++   + L      +    ++ +LTI +  SFA  WL+PR+ +F++ +P+ID+++
Sbjct: 68  AYFPGVRAAFHELRYCTQTLLQSRSNSVLTISTLVSFASKWLLPRLASFQQAFPNIDVRV 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
               E ++F+  G+D AI +       L    + ++ I PVC+P   Q   +  +  +L 
Sbjct: 128 TASTERVNFREGGVDAAIRYGSGDWKGLRADWLMADEIFPVCSPRLLQGPKVLENPRDLA 187

Query: 199 NTTLLHDNQAWNYNSDADEWKTWAN-ANQLENLENISRIGFDRSDLAVIAAINNAGIAMG 257
             TLL  +         D+W  W + A Q + L   SR+ FD + +AV AA++  G+ +G
Sbjct: 188 RHTLLQVS-----GVTRDDWSAWLSAAGQPKKLAEGSRLTFDLAMMAVQAAVDGLGVCIG 242

Query: 258 RFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQKVKLFIDWL 306
           R + V+  L +G L+ P+          Y+V+        KV+ F  WL
Sbjct: 243 RSTYVEDDLKAGRLVAPFDLRLKSDLGFYFVSPHETADTPKVQAFRTWL 291