Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella amazonensis SB2B

 Score =  146 bits (369), Expect = 5e-40
 Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 9/289 (3%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ +  FE AARH SF+ AA+EL +T +A+SH+I  LE+ +G+KLF R +R ++LTEEGQ
Sbjct: 8   LNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLTEEGQ 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
             +  ++     L+     +      G LT+   PSFA  WLVPR+  F E  P ID+++
Sbjct: 68  SYFLDIKDIFTQLSDATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKNPDIDVRI 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
              +         +DVAIY+       L   ++ +E +IPVC+P     +    +  +L 
Sbjct: 128 KAVDSEEGSLTDDVDVAIYYGQGSWPGLRADKLRNEVLIPVCSPMLLNGHKPLETPADLK 187

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
           + TLLHD           +W+ W     + ++       F  S L + AA +  G+A+G 
Sbjct: 188 HHTLLHD-------MSRHDWQAWFRQCGVTDVNVNQGPIFSHSSLVLQAAAHGQGVALGY 240

Query: 259 FSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHN-QKVKLFIDWL 306
             L +  + +G L+ P+    ++ K  YY+    N     K+  F +W+
Sbjct: 241 SVLARPDIKAGRLVVPFQEV-LVSKDAYYLVCQQNHAELGKIVAFREWM 288