Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (352), Expect = 5e-38
 Identities = 88/293 (30%), Positives = 135/293 (46%), Gaps = 11/293 (3%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ L  FE AARH  F+ AA EL +TP+A+SH++  LE+ +G+ LF R  + + LT  G+
Sbjct: 8   LNALRAFEAAARHGGFTGAARELHVTPAAVSHQVKGLEDALGVSLFHRLAKGLELTAAGR 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
                L    + L +    +K G   G LT+   PSFA  WL PR+ +F   YP I L L
Sbjct: 68  AYLPELTAGFDQLARASERLKRGALVGRLTVSVLPSFAAGWLAPRLASFLRRYPDILLDL 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
            +    + F    +D+ I +   +   L+   I  E + P+C P             +L 
Sbjct: 128 RSTPRTVDFIRERVDLGIRYGGGIYPGLASYRILEEEVFPICAPALLNGPVPLRGFADLR 187

Query: 199 NTTLLHD-----NQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAG 253
           +  LLHD      + W        W+ W     + +++  +  GF  S   + A +   G
Sbjct: 188 HHVLLHDPGILPGEPWT------GWEPWLAEAGVTDIDLEAGHGFTESIAMIHACVAGLG 241

Query: 254 IAMGRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQKVKLFIDWL 306
           + +GR  LV   L SG L+ P+P +       + V   P++ N K   FI WL
Sbjct: 242 VGIGRSGLVTELLRSGRLVRPFPVSRPADFSYWVVVPPPSQTNPKAAAFIGWL 294