Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  143 bits (360), Expect = 6e-39
 Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 5/294 (1%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L  L  FE  ARH SF  AADE+ +T +A+SH++  LE  IG+KL ERT R V LT  G+
Sbjct: 8   LVSLRAFEAVARHKSFRKAADEICVTHAAVSHQVKALETSIGVKLLERTSRSVELTPAGE 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
           + Y  +++ +  + +    I+  E   +L + S  SF   WL PR+  F +  P   +++
Sbjct: 68  QYYPPVREHIQGIIKATRRIQTPEEPDVLLVQSYASFNTMWLQPRLADFLQDNPDTRVRI 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
           ++  E+  +     DV ++       +     +F   I PVC PE     S    ++ L 
Sbjct: 128 VSTFEDGDYDMHRFDVGVFNAPPFDKRFDYSPLFETDIYPVCAPEALNAPSGGMPLEELR 187

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
           N  LL     WN   + D+W  W +A  L+         FD   L   A +NN GI++ R
Sbjct: 188 NFLLLSVPNTWN---EPDDWDCWLDAAGLDRETMKFGSVFDNYPLVREAVLNNHGISVAR 244

Query: 259 FSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNK-HNQKVKLFIDWLESQVK 311
                  L  G L+ P+ +  V    R+Y+AT   +  N K+  FIDWL  Q++
Sbjct: 245 APFCARDLERGRLVRPF-DISVPEPGRWYLATQKERAPNPKLDTFIDWLFEQIE 297