Pairwise Alignments

Query, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (382), Expect = 2e-41
 Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 9/289 (3%)

Query: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78
           L+ +  FE AARH SF+ AA+EL +T +A+SH+I  LEE +G+KLF R +R ++LTEEGQ
Sbjct: 8   LNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEYLGLKLFRRKNRSLLLTEEGQ 67

Query: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138
             +  ++     L      +      G LT+ + PSFA  WLVPR+  F E  P ID+++
Sbjct: 68  GYFLDIKDIFVQLADATDRLLARSAIGSLTVSTSPSFAIQWLVPRLANFSENNPDIDVRI 127

Query: 139 LTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSLTSSMDNLY 198
              ++  S     +DVAIY+       L   ++ +E +IPVC+P         S   +L 
Sbjct: 128 KAVDDETSSLTDDVDVAIYYGMGNWPGLRADKLRNEVLIPVCSPMLLSGPKPLSQPSDLK 187

Query: 199 NTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAMGR 258
           + TLLHD       S   +W+ W     + ++       F  S L + AA +  G+A+G 
Sbjct: 188 HHTLLHD-------SSRHDWQAWFRQCGINDINVNQGPIFSHSSLVLQAAAHGQGVALGY 240

Query: 259 FSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHN-QKVKLFIDWL 306
             L +  + +G L+ P+P   ++ K  YY+    N     K+  F  W+
Sbjct: 241 SVLARPDIKAGRLVCPFPEV-LVSKNAYYLVCQQNHAEIGKIVAFRKWM 288