Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., cytochrome d ubiquinol oxidase, subunit II from Synechococcus elongatus PCC 7942

 Score =  119 bits (297), Expect = 2e-31
 Identities = 84/362 (23%), Positives = 172/362 (47%), Gaps = 36/362 (9%)

Query: 10  IWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLITAGG 69
           +W+ ++   L  +++ DGFD+GVG +L +   SE+ + +++ S+   WD N+ WL+  GG
Sbjct: 11  VWFVILALFLFLYVVLDGFDLGVG-ILSLTTSSENRRTILMTSLGNIWDANETWLVLMGG 69

Query: 70  ALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLSGLI 129
           ALF A+PL Y T  ++LY+ ++L++  L LR +A E+R   +    ++  +++      +
Sbjct: 70  ALFGAFPLAYGTILNALYLPIFLMIFGLILRAVAFEFRENAER---KRFWNLAFGSGSFL 126

Query: 130 PPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSAWLT 189
             L  G A G+++ G+           Y G   D +   S+L     +   ++ GS +L 
Sbjct: 127 AALAQGFALGSVLTGIRTDAGG----HYIGGLWDWLNWHSLLVSLTLIQAYVLIGSTYLI 182

Query: 190 LKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKVVFQ 249
           ++T+  L +    TA+++ +      ++G   +     ++  S+ D       L +V F 
Sbjct: 183 MRTAGSLQETHFQTAKLATITT----LVGAIAITATTPFISESARD------RLLQVPF- 231

Query: 250 QAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCASVTNACIILTAGFAM 309
                      Y +     +G L++A+ ++ S   K +   F+   +      +  G  +
Sbjct: 232 ----------IYGFTLIPVLGVLLIAI-LWRSLSRKQEFAPFIWTVLLFLLTFIGLGLLV 280

Query: 310 FPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFGRLDKQY 369
           FP+++P        +T++ A +S   L  M      ++PI+LFY  ++Y    G++  ++
Sbjct: 281 FPYVIPP------QITIYQAAASPSALVFMIVFIGFLIPIMLFYNIYNYIVFRGKVVVEH 334

Query: 370 IE 371
            E
Sbjct: 335 SE 336