Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., quinol oxidase subunit II transmembrane protein from Sinorhizobium meliloti 1021

 Score =  157 bits (398), Expect = 3e-43
 Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 42/365 (11%)

Query: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66
           L LIW  +I   ++ +++ DGFD+GVG L P   +   D+ VM+NS+AP WDGN+ WL+ 
Sbjct: 5   LPLIWAAIIAFAVLAYVVLDGFDLGVGILFPFFPEKH-DRDVMMNSVAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126
            GG L A +PL YAT   +LY  +  +L+ L  R +A EYR +  T     + + + +  
Sbjct: 64  GGGGLLAVFPLAYATILPALYAPIIAMLIGLIFRGVAFEYRWR--TQRGEFLWNWAFAGG 121

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQGSA 186
            ++     G+A G L+QG+P    A     Y G + D +TPFS+ +G   V+   + G+ 
Sbjct: 122 SMLAAFAQGLALGALVQGIPVENRA-----YVGGWWDWLTPFSIATGLAIVIGYALLGAT 176

Query: 187 WLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAISNPLNKV 246
           WL +KT   L ++AR  A  + L                     V+++   ++  P  + 
Sbjct: 177 WLVMKTRGELAERARGVALRTALA-------------------TVAAMGIVSLWTPFLEP 217

Query: 247 VFQQAGAWLTNFERYPWMWFAPMGGLMMAMGVFLSAKW---KNDAITFVCASVTNACIIL 303
           V+      L  +  +P   F+ +  L++   ++L  K    ++D   F+ A        +
Sbjct: 218 VY------LERWFGWPTAIFSVIVPLLVLGCLYLLLKGIRDRHDVQPFIAALGLFVLGYI 271

Query: 304 TAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFSYRTMFG 363
             G + +PF++P       SLT+WDA + + +L  +   A V++P+IL YTA++Y    G
Sbjct: 272 GIGISFYPFMVPP------SLTIWDAAAPDESLAFLLVGALVLVPMILTYTAYAYWVFRG 325

Query: 364 RLDKQ 368
           ++D +
Sbjct: 326 KVDPE 330