Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., cytochrome d ubiquinol oxidase subunit II from Parabacteroides merdae CL09T00C40

 Score =  107 bits (266), Expect = 7e-28
 Identities = 102/381 (26%), Positives = 174/381 (45%), Gaps = 42/381 (11%)

Query: 4   YDTLRLIWW---GLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60
           Y  L+  WW    L+GALL+  +    F  G  +LL  +G++E  +++++NS    W+  
Sbjct: 5   YILLQHYWWFLVSLLGALLVFLL----FVQGGQSLLFTIGKTELQQKMLLNSTGRKWEFT 60

Query: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120
              L+T GGA FA++PL Y+TSF   Y    LIL    L+ ++ EY++K      +K   
Sbjct: 61  FTTLVTFGGAFFASFPLFYSTSFGGAYWVWMLILACFVLQAVSYEYQSKKGNLLGKKTYQ 120

Query: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDL-ITPFSVLSG------ 173
           + + L+G++ P+L G A G    G  F +N   + D     I    TP+  L        
Sbjct: 121 VFLLLNGILGPILLGTAVGTFFSGAEFVVNKGQLTDVAMPVISTWATPWHGLEAAFVFWN 180

Query: 174 ---GIGV-LMALVQGSAWLTLKTSDI-LHKKARLTAQISVLCLFGLFIIGGFMVHGM--N 226
              G+ V  +A +Q   +      D  + K++R    I        F++  F+VH +  +
Sbjct: 181 VCLGLAVFFLARIQALLYFINNIDDAEIVKRSRKHLVIETALFLVFFLV--FLVHLLLAD 238

Query: 227 GYLIVSSLDYNAISNPLNKVVFQQAGAWLTNFERYP----WMWFAPMGGLMMAMGVFLSA 282
           G+ +          +P  K V+ Q   +  N    P     +     G L   +   LS 
Sbjct: 239 GFAV----------DPETKEVYMQPYKYFMNLVEMPAVPVVLLVGVAGVLYGIVRTILSD 288

Query: 283 KWKNDAITFVCAS--VTNACIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMT 340
            WK   I F  A   +T   ++L AG+    +  PS  +   SLT+ ++ SS  TL +M+
Sbjct: 289 TWKK-GIWFSGAGTVLTVLALLLCAGWNNTAY-YPSVADLQSSLTIGNSCSSPFTLEVMS 346

Query: 341 GVAFVMLPIILFYTAFSYRTM 361
            V+ +++P +L Y  +++R +
Sbjct: 347 YVS-ILVPFVLGYIFYAWRAL 366