Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d oxidase cyd, subunit II from Dechlorosoma suillum PS

 Score =  362 bits (929), Expect = e-105
 Identities = 179/381 (46%), Positives = 247/381 (64%), Gaps = 6/381 (1%)

Query: 1   MFEYDTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGN 60
           +F+Y TL+LIWW L+G LLIGF I DG DMGVG LLPILG+ ++D+RVMIN++APHWDGN
Sbjct: 2   LFDYLTLKLIWWLLVGVLLIGFAIMDGHDMGVGILLPILGRDDTDRRVMINTVAPHWDGN 61

Query: 61  QVWLITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICD 120
           QVW ITAGGA+FAAWP VYAT+FS +Y A+ L+L AL+ RP+  EYR+K+  P+WR   D
Sbjct: 62  QVWFITAGGAIFAAWPFVYATAFSGMYWALLLVLFALFFRPVGFEYRSKLPHPAWRSAWD 121

Query: 121 ISISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMA 180
             +     +P L+FGVAFGNL QG+PF L+  +   Y GSF  L+ PF++L G + + + 
Sbjct: 122 WGLFAGSAVPALVFGVAFGNLFQGVPFHLDETMRSFYTGSFWALLNPFALLCGVVSLSLL 181

Query: 181 LVQGSAWLTLKTSDILHKKARLTAQISVLCLFGLFIIGGFMVHGMNGYLIVSSLDYNAIS 240
            +QG+ +L  +T   L  +AR    +  + L   F   G  V  ++G++I S  D     
Sbjct: 182 ALQGATFLAHRTEGELQARARGAGTVLAVLLLAAFSAAGVWVGRLDGFVIQSIADVGGAL 241

Query: 241 NPLNKVVFQQAGAWLTNFERYPWMWFAP---MGGLMMAMGVFLSAKWKNDAITFVCASVT 297
           NPL K V +Q GAW  N+++YP +W  P     G ++A+    + K     + FV +SV 
Sbjct: 242 NPLMKEVVRQPGAWFANYQKYPLLWAVPALAYAGGLLALACLRAGK---ILVAFVGSSVA 298

Query: 298 NACIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYTAFS 357
              +ILTAG A+FPF++PSS  P  SLT WDATSS  TLN+M  VA +  PI++ YT ++
Sbjct: 299 CLAVILTAGVALFPFVLPSSTLPKASLTAWDATSSYVTLNVMLYVALIFTPIVIAYTGWA 358

Query: 358 YRTMFGRLDKQYIERNHHSLY 378
           YR M G++ + YI  N  +LY
Sbjct: 359 YRVMAGKVTRDYIVANDKALY 379