Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., cytochrome BD ubiquinol oxidase subunit II from Cupriavidus basilensis FW507-4G11

 Score =  106 bits (264), Expect = 1e-27
 Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 60/370 (16%)

Query: 5   DTLRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWL 64
           D L +I+  L+G  ++ ++I+DG+D+GVG L+     +E D  VM+ SI P WD N+ WL
Sbjct: 8   DALPVIFMALMGVSMLVYVISDGYDLGVGMLMHRATPAEKD--VMVASIGPFWDANETWL 65

Query: 65  ITAGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDT---PSWRKICDI 121
           +   G L  A+P  +    + LY+ + L+L+ L LR +A ++R K+ +   P W ++   
Sbjct: 66  VLGVGILLVAFPKAHGLILTELYLPVTLMLVGLILRGVAFDFRVKVKSAHKPMWDRLFFA 125

Query: 122 SISLSGLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMAL 181
             +++ +    + G        G  + L A  +                    + + MA 
Sbjct: 126 GSTIASVSQGWMLGRYISGFGTGWNYPLFAAAI-------------------AVALPMAY 166

Query: 182 V-QGSAWLTLKTSDILHKKARLTAQIS---VLCLFGLFIIG-GFMVHGMNGYLIVSSLDY 236
           V  G+ WL +KT   L ++A   A I+   ++C   L  +   ++   +     V     
Sbjct: 167 VLLGACWLVMKTEGELQQRAVRWAGIAWAPMVCGLALISVATPWISPAVRERWFVLPQIV 226

Query: 237 NAISNPLNKVVFQQAGAWLTNFE--RYPWMWFAPMGGLMMAMGVFLSAKWKNDAITFVCA 294
             +S PL   V   A   L N    R P  W       ++ +GVF+ +            
Sbjct: 227 ALVSIPLVTGVALVAVRMLLNTRVVRGPVSWLP----FVLLIGVFVLS------------ 270

Query: 295 SVTNACIILTAGFAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYT 354
                   L   +++FP+++       H LT+W A SS + L ++     + +P I  YT
Sbjct: 271 -------FLGLAYSIFPYVV------IHRLTIWQAASSPQALKVILVGVCISVPAIAGYT 317

Query: 355 AFSYRTMFGR 364
            FSYR   G+
Sbjct: 318 VFSYRVFRGK 327