Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., ubiquinol oxidase subunit II, cyanide insensitive from Burkholderia phytofirmans PsJN

 Score =  139 bits (351), Expect = 9e-38
 Identities = 102/371 (27%), Positives = 178/371 (47%), Gaps = 60/371 (16%)

Query: 7   LRLIWWGLIGALLIGFMITDGFDMGVGALLPILGQSESDKRVMINSIAPHWDGNQVWLIT 66
           L +IW  +IG  +  +++ DGFD+GVG L P   + + ++ VM+N++AP WDGN+ +L+ 
Sbjct: 5   LPVIWAAIIGLGVFIYVMLDGFDLGVGLLFPFF-EGKGEREVMLNTVAPVWDGNETFLVL 63

Query: 67  AGGALFAAWPLVYATSFSSLYIAMYLILLALWLRPLALEYRAKIDTPSWRKICDISISLS 126
            G AL+ A+P+VY+T   + Y+ + L+++ L  R  A E RAK      +   D++    
Sbjct: 64  GGAALYGAFPVVYSTLLPANYMPLILMVVGLIFRGAAFELRAK--ATRTQHAWDLAFIGG 121

Query: 127 GLIPPLLFGVAFGNLMQGLPFSLNALLMVDYHGSFIDLITPFSVLSGGIGVLMALVQ-GS 185
             +  +  G+  G+L+QG+      ++   + G   D  +PFSV   G GVL+     G 
Sbjct: 122 SALAAMCQGITLGSLLQGI-----KIVDDKFAGDPFDWFSPFSVFC-GFGVLLTYATLGC 175

Query: 186 AWLTLKTSDILHKKARLTAQISVLCLF-GLFIIGGFMVHGMNGYLIVSSLDYNAISNPLN 244
            WL LKT   L ++ R   +  +  LF  + I+  + V G+                   
Sbjct: 176 GWLILKTDGELQRRMREVMRPLIAVLFLAITIVSLWTVLGLPAV---------------- 219

Query: 245 KVVFQQAGAWLTNFERYPWM------WFAPMGGLMM--AMGVFLSAKWKNDAITFVCASV 296
                          R+ W       WF P+  L++   +G++ S   +++A  F+ +  
Sbjct: 220 ---------------RHRWFFSGNLGWFLPVPVLVVLCVLGIYRSLTRRHEATPFLLSLA 264

Query: 297 TNACIILTAG--FAMFPFIMPSSFEPSHSLTLWDATSSERTLNIMTGVAFVMLPIILFYT 354
              C +   G   +++P+I+P       SLT+WDA+SS  + +       ++LP+IL Y 
Sbjct: 265 --ICFLGYTGLIISIWPYIIPP------SLTIWDASSSHSSQSFALVGTIIVLPVILVYN 316

Query: 355 AFSYRTMFGRL 365
           A  YR   G++
Sbjct: 317 AMQYRVFRGKV 327