Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Cytochrome bd-type quinol oxidase, subunit 1 from Pseudomonas stutzeri RCH2

 Score =  710 bits (1833), Expect = 0.0
 Identities = 339/522 (64%), Positives = 426/522 (81%), Gaps = 3/522 (0%)

Query: 8   VVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGINF 67
           VV+LSRLQFA+TAM+HFLFVPLT+G++ LLAIMES+YV+TGKQ+Y+DMT+FWGKLFGINF
Sbjct: 6   VVDLSRLQFAMTAMYHFLFVPLTLGLAFLLAIMESVYVMTGKQVYKDMTQFWGKLFGINF 65

Query: 68  ALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLSK 127
           ALGVTTGLTMEFQFGTNW+YYSHYVGDIFGAPLAIE L+AFFLESTF+GLFFFGW RLSK
Sbjct: 66  ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 125

Query: 128 RQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQVK 187
            QHL +TWLVALGS+ SALWIL+ANGWMQNPVG+EFN++TMRME+  F  ++ NPVAQVK
Sbjct: 126 VQHLAVTWLVALGSNLSALWILIANGWMQNPVGSEFNFETMRMELVDFGALLFNPVAQVK 185

Query: 188 FLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDESGY 247
           F+HTV++ Y  GA+F+L +SS+YLL+ RD+ FARRSFAIAA FG+A+ ISVI+LGDESGY
Sbjct: 186 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLGFARRSFAIAAVFGLASTISVIILGDESGY 245

Query: 248 KLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSFDEQ 307
           ++GDVQKVKLAAIEAEW T PAPA FTLFGLPNQ+E +TDY +KIPY +GLIATRS DE+
Sbjct: 246 EIGDVQKVKLAAIEAEWDTHPAPAGFTLFGLPNQQEMRTDYEVKIPYALGLIATRSVDEE 305

Query: 308 VTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRYTDT 367
           + G+  L  EH LRIRNGM+AY+ L+ L++GD S E    F + KHDLGYGLLLK+YT  
Sbjct: 306 IKGIKQLVAEHELRIRNGMLAYERLQVLRSGDKSAEAIAAFNEVKHDLGYGLLLKKYTAD 365

Query: 368 ITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWVL 427
           + DA+E QI+ AA D++P V+ LFW+FR+MV  GF+ML +F  A   + ++    KPW+L
Sbjct: 366 VVDASEEQIKLAALDTIPNVFSLFWTFRVMVAAGFLMLLLFALASWASIKRDAESKPWLL 425

Query: 428 KAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLYT 487
           + AL+S+PLPWIA + GW+VAE+GRQPW+I EVLP  ++ S+    ++  SL  +++ Y+
Sbjct: 426 RFALFSLPLPWIAAQTGWYVAEHGRQPWSIAEVLPTHLSTSTLAAGDIWGSLIALVAFYS 485

Query: 488 VFIFVESYLIVTVARKGPSSLKTGRYQDEQSLYEHKLAQQVQ 529
           + + +E +L++  AR GPSSL TGRY  E    E   A QVQ
Sbjct: 486 LLLVIEMFLMIRFARLGPSSLHTGRYHFE---LEAIAASQVQ 524