Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., quinol oxidase subunit I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  209 bits (533), Expect = 1e-58
 Identities = 110/307 (35%), Positives = 170/307 (55%), Gaps = 5/307 (1%)

Query: 7   DVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGIN 66
           D   L+R+QFA T  FH +F   +IG++  LA++E++++    ++Y ++  FW  +F + 
Sbjct: 29  DATVLARIQFAFTVSFHIIFPAFSIGLASYLAVLEALWLWKKDEVYLELFNFWKTIFAVA 88

Query: 67  FALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLS 126
           F +GV +G+ M +QFGTNWS +S   G + G  +  E L AFFLE+ F+G+  FG +R+ 
Sbjct: 89  FGMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMGYEVLTAFFLEAGFLGVMLFGLNRVG 148

Query: 127 KRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQV 186
            + H   T +VALG+  SA WIL  N WMQ P G   N +  +     +  V+ NP    
Sbjct: 149 PKLHFFATAMVALGTLISATWILAVNSWMQTPAGFSVN-EAGQFIPDDWWAVIFNPSFPY 207

Query: 187 KFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVL--GDE 244
           +  H V +AY   A  +    +++LL+      AR  F++A    MAAI++ I +  GD+
Sbjct: 208 RLTHMVLAAYLTTAFVVGACGAWHLLRKTAPRRARTMFSMA--MWMAAIVAPIQIFAGDQ 265

Query: 245 SGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304
            G    + Q  K+ A+E  + + P  A   LFG+PN  E + DYA++IP L  LI   S 
Sbjct: 266 HGLNTLEHQPAKVMAMEGHYQSHPEGAPLILFGMPNSAEKRVDYALEIPKLSSLILKHSL 325

Query: 305 DEQVTGL 311
           D  + GL
Sbjct: 326 DAPLAGL 332



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 1/134 (0%)

Query: 370 DANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWVLKA 429
           DA  A +    +D  P V  +FWSFR+MV  GF ML +   +L    R  +     + +A
Sbjct: 326 DAPLAGLDTIPEDRHPPVAIVFWSFRVMVAIGFAMLGLGLWSLWCRLRGTLDTNAALHRA 385

Query: 430 ALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSL-AIILSLYTV 488
           A+   P  ++A+ AGW   E GRQP+ I   L    ++S      +  SL A I+  + V
Sbjct: 386 AVLMGPAGFVAVLAGWITTEVGRQPYTIYGHLLTADSISPIAAPAVGASLVAFIIVYFLV 445

Query: 489 FIFVESYLIVTVAR 502
           F     Y++  +AR
Sbjct: 446 FGAGTFYILRLMAR 459