Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd-I oxidase subunit I (RefSeq) from Shewanella amazonensis SB2B

 Score =  759 bits (1959), Expect = 0.0
 Identities = 371/511 (72%), Positives = 430/511 (84%)

Query: 7   DVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGIN 66
           +VVELSRLQFALTAM+HFLFVPLT+GM+ LLAIMES+YV+T KQIY+DMT+FWGKLFGIN
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTNKQIYKDMTKFWGKLFGIN 64

Query: 67  FALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLS 126
           FALGVTTGL MEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVG+FFFGW R S
Sbjct: 65  FALGVTTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRFS 124

Query: 127 KRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQV 186
           KRQHL +TWL+ALG++ SALWILVANGWMQNPVG+ FNY+TMRMEMTSFAEVV NPVAQV
Sbjct: 125 KRQHLTVTWLMALGTNMSALWILVANGWMQNPVGSVFNYETMRMEMTSFAEVVFNPVAQV 184

Query: 187 KFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDESG 246
           KF+HTVAS Y  GAMF+L +S+YY+L+ RD+ FARRSFAIAA+FGMA+I+SVIVLGDESG
Sbjct: 185 KFVHTVASGYVAGAMFVLAISAYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDESG 244

Query: 247 YKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSFDE 306
           YK+G+VQ+VKLAA+EAEWHTEPAPA+FT+ G PNQ+   TD AIKIPY MG+IATRS DE
Sbjct: 245 YKVGEVQRVKLAAVEAEWHTEPAPASFTVVGFPNQETMHTDGAIKIPYAMGIIATRSLDE 304

Query: 307 QVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRYTD 366
           +VTGL DL  EH +RIRNGM AY +LE L+AG+   E +  FE+ K DLGYGLLLKRYTD
Sbjct: 305 EVTGLRDLVDEHEVRIRNGMKAYAMLEELRAGNKDPELKAAFEEAKIDLGYGLLLKRYTD 364

Query: 367 TITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWV 426
            + DA E QI+ AA DS+P+V PLFWSFR+MVG G IMLFVF AA  Q+ R RI  K WV
Sbjct: 365 KVVDATEEQIKAAAKDSIPSVAPLFWSFRVMVGLGVIMLFVFAAAFWQSTRHRIEEKKWV 424

Query: 427 LKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLY 486
           LKAAL+S+PLPWIAIE GWFVAEYGRQPW I EVLP  ++ SS    +L  S+A I   Y
Sbjct: 425 LKAALYSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLNPSDLWFSIASITLFY 484

Query: 487 TVFIFVESYLIVTVARKGPSSLKTGRYQDEQ 517
           +V + +E +L+   AR GPSSLKTGRY  E+
Sbjct: 485 SVLLVIELFLMFKYARLGPSSLKTGRYHFEK 515