Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Cytochrome bd ubiquinol oxidase, subunit I (NCBI) from Rhodospirillum rubrum S1H

 Score =  210 bits (535), Expect = 8e-59
 Identities = 117/317 (36%), Positives = 177/317 (55%), Gaps = 16/317 (5%)

Query: 7   DVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGIN 66
           D   L+R+QFA T  FH +F   TIG++  LA++E+ +++T ++++ D+ + W ++F + 
Sbjct: 7   DATLLARIQFAFTVSFHIIFPAFTIGLASYLAVLEATWLITKRRVFLDLYKHWVRVFALT 66

Query: 67  FALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLS 126
           F +GV +GL M +QFGTNW  ++   G I G  +  E L AFFLE+ F+G+  FG +R+ 
Sbjct: 67  FGMGVVSGLVMSYQFGTNWGPFAKATGSILGPLMGYEVLTAFFLEAGFLGVMLFGLTRVG 126

Query: 127 KRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQV 186
            R H   T +VA+G+  SA WIL AN WM  P G        R     + E+V NP    
Sbjct: 127 PRLHFFATLMVAVGTLISAFWILAANSWMHTPTGHILENGIFR--PGDWMEIVFNPSFPY 184

Query: 187 KFLHTVASAYTCGAMFILGVSSYYLL------QGRDI----EFARRSFAIAATFGMAAII 236
           + +H V +AY   A+ +   ++  LL      +GR+     E +R +FA+A   GM A+ 
Sbjct: 185 RLVHMVTAAYLTTALVVGAAAARRLLLLRKSGEGRNDPGKGEASRLAFAMA--MGMIALT 242

Query: 237 SVI--VLGDESGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPY 294
           + +   LGD  G    + Q  K+AA+E  W    +PA   LFGLP+ +   T YA++IPY
Sbjct: 243 APLQAFLGDLHGLNTLEHQPAKIAAMEGHWQETISPAPLILFGLPDAEAETTRYAVEIPY 302

Query: 295 LMGLIATRSFDEQVTGL 311
           L  LI T S D  + GL
Sbjct: 303 LGSLILTHSLDGALQGL 319



 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 382 DSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWVLKAALWSIPLPWIAI 441
           D  P V P FWSFR+MVG G +M+ +   A+    R R+   P + + AL   P  +IA+
Sbjct: 326 DRPPVVIP-FWSFRVMVGLGLLMIALGALAVWARLRGRLYDSPALYRFALLMGPAGFIAV 384

Query: 442 EAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITS-LAIILSLYTVFIFVESYLIVTV 500
            AGW   E GRQP+ +  ++  +  VS      +  S LA I+  + VF     YL+  +
Sbjct: 385 LAGWVTTEVGRQPFVVYGLMRTSDMVSPIGAPGVAASLLAFIVVYFAVFGVGIRYLLKMM 444

Query: 501 AR 502
           A+
Sbjct: 445 AQ 446