Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., cytochrome d ubiquinol oxidase subunit 1 from Phaeobacter inhibens DSM 17395

 Score =  244 bits (623), Expect = 5e-69
 Identities = 152/501 (30%), Positives = 239/501 (47%), Gaps = 66/501 (13%)

Query: 11  LSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGINFALG 70
           L+R+QFA T  FH +F   +IG++  LA++ + ++ T  + Y  +  +W K+F + F +G
Sbjct: 10  LARMQFAFTVSFHIIFPAFSIGLASYLAVLNAQWLRTRDETYYTLFEYWKKIFAVAFGMG 69

Query: 71  VTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRLSKRQH 130
           V +G+ M +QFGTNWS +S   G + G  +A E L AFFLE+ F+G+  FG +R+  R H
Sbjct: 70  VVSGIVMSYQFGTNWSVFSDKTGPVLGPLMAYEVLSAFFLEAGFLGIMLFGRARVGDRLH 129

Query: 131 LLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQVKFLH 190
           +  T +VA G+  SA WIL  N WMQ P G   N +  +     + ++V NP    + +H
Sbjct: 130 MFATAMVAFGTLMSATWILSVNSWMQTPAGYSIN-EVGQFVPEDWWQIVFNPSFPYRLVH 188

Query: 191 TVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDESGYKLG 250
            V +A+   A+ + GV + +LL+ +    ARR F++A    +      I  GD  G    
Sbjct: 189 MVLAAFLTTALVVGGVGALHLLRDKTDAAARRMFSMAMWMLVVVAPMQIFAGDMHGLNTL 248

Query: 251 DVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSFDEQVTG 310
           + Q  K+ A+E  + + P  A   LFGLPN +    DYAI+IP L  LI           
Sbjct: 249 EHQPAKVMAMEGHYDSHPEGAPLILFGLPNAETKTIDYAIEIPKLSSLIL---------- 298

Query: 311 LHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRYTDTITD 370
                                                    KHDL   L      DTI D
Sbjct: 299 -----------------------------------------KHDLNAPLA---GLDTIPD 314

Query: 371 ANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWVLKAA 430
           A+E           P V  +FWSFR+MVG GF M  +   +L    R R+    W+ +A+
Sbjct: 315 ADE-----------PPVAIVFWSFRVMVGLGFAMAGLGLWSLWGRLRGRLHDSRWLHRAS 363

Query: 431 LWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLYTVFI 490
           +   P+ ++A+ AGW   E GRQP+ +  +L  + +++  +   +  SL   + +Y    
Sbjct: 364 IAMGPMGFVAVLAGWITTEVGRQPFTVYGLLRTSDSLAPVSAPAVAASLTAFVIVYFFIF 423

Query: 491 FVESYLIVTVARKGPSSLKTG 511
              ++ I+ +  K P++   G
Sbjct: 424 GAGTFYILRMMNKAPATRNLG 444