Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., cytochrome bd-type quinol oxidase, subunit 1 from Dechlorosoma suillum PS

 Score =  601 bits (1549), Expect = e-176
 Identities = 293/507 (57%), Positives = 379/507 (74%), Gaps = 2/507 (0%)

Query: 5   MID--VVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKL 62
           MID  VV+LSRLQFA TAM+HFLFVPLT+G+S LL +ME+ YV++GK+IY+DMT+FWGKL
Sbjct: 1   MIDSTVVDLSRLQFAATAMYHFLFVPLTLGLSWLLVVMETAYVMSGKEIYRDMTKFWGKL 60

Query: 63  FGINFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGW 122
           +GINFALGVTTG+TMEFQFGTNW+YYSHYVGDIFGAPLAIE L+AFFLEST VGLFFFGW
Sbjct: 61  YGINFALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTMVGLFFFGW 120

Query: 123 SRLSKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNP 182
            RLSK  HL +T L+ALG++ SA+ IL+ANGWMQ+PVG+ FN  TMRME+  FA +V NP
Sbjct: 121 QRLSKAGHLAVTVLMALGTNLSAVLILIANGWMQDPVGSTFNPVTMRMELVDFAALVFNP 180

Query: 183 VAQVKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLG 242
           VAQ KF+HTVA+ Y  G++F+LG+SS+YLL+G  +EFARRSF IAA FG+A  +SVIVLG
Sbjct: 181 VAQSKFVHTVAAGYVTGSLFVLGISSWYLLKGLHVEFARRSFRIAAAFGLAGCLSVIVLG 240

Query: 243 DESGYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATR 302
           DESGY + + QK KLAAIEA W TE APA F L   PN++    D+ I+IPY++GLIATR
Sbjct: 241 DESGYAVSESQKSKLAAIEAMWETEAAPAGFNLLAWPNEERQANDWEIRIPYVLGLIATR 300

Query: 303 SFDEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLK 362
           S  E + G+ ++R  +  RI +G+ A   LE L+   A    +  F + + D+GYG+L+K
Sbjct: 301 SVSETLPGIKEIRAANRQRIESGVQAVLALEALRQNPADAAAKATFAKHQQDMGYGMLVK 360

Query: 363 RYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITH 422
           RY+  +  A  A + QAA DS+P V PLFW+FR+MV  GF ML + G A   + +     
Sbjct: 361 RYSPDLAQATPAMLDQAAHDSVPRVAPLFWTFRLMVLLGFAMLLLVGLAFWYSVKNSFQQ 420

Query: 423 KPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAII 482
           K W+L+ ALW IP+PWIAI++GWFVAEYGRQPW +  +LP  ++ SS +  +L  S+A  
Sbjct: 421 KTWLLRWALWFIPMPWIAIQSGWFVAEYGRQPWTVFGMLPTHLSASSLSAASLWGSIAGF 480

Query: 483 LSLYTVFIFVESYLIVTVARKGPSSLK 509
           +  YT+ +  E YL+   AR GP++L+
Sbjct: 481 VGFYTLLLVAEMYLMFKYARLGPAALQ 507