Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., Probable integral membrane cytochrome D ubiquinol oxidase (subunit I) CydA (cytochrome BD-I oxidase subunit I) from Mycobacterium tuberculosis H37Rv

 Score =  277 bits (708), Expect = 7e-79
 Identities = 171/517 (33%), Positives = 266/517 (51%), Gaps = 74/517 (14%)

Query: 6   IDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGI 65
           ++VV++SR QF +T ++HF+FVPLTIG++ L+A+M++++V+T    +  +T+F+GKLF I
Sbjct: 1   MNVVDISRWQFGITTVYHFIFVPLTIGLAPLIAVMQTLWVVTDNPAWYRLTKFFGKLFLI 60

Query: 66  NFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRL 125
           NFA+GV TG+  EFQFG NWS YS +VGD+FGAPLA+E L AFF ESTF+GL+ FGW+RL
Sbjct: 61  NFAIGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLAMEGLAAFFFESTFIGLWIFGWNRL 120

Query: 126 SKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQ 185
            +  HL   W+VA+  + SA +I+ AN +MQ+PVGA +N  T R E++S   ++ N  AQ
Sbjct: 121 PRLVHLACIWIVAIAVNVSAFFIIAANSFMQHPVGAHYNPTTGRAELSSIVVLLTNNTAQ 180

Query: 186 VKFLHTVASAYTCGAMFILGVSSYYLLQGRDIE-------FARRSFAIAATFGMAAIISV 238
             F HTV+ A      F+  VS+++L++              R +  +     +AA   +
Sbjct: 181 AAFTHTVSGALLTAGTFVAAVSAWWLVRSSTTHADSDTQAMYRPATILGCWVALAATAGL 240

Query: 239 IVLGDESGYKLGDVQKVKLAAIEAEWHTEPAPAAFTL-FGLPNQKEGKTDYAIKIPYLMG 297
           +  GD  G  +   Q +K+A+ E+   T+  P    L  G  N  +  T   I++PY++ 
Sbjct: 241 LFTGDHQGKLMFQQQPMKMASAESLCDTQTDPNFSVLTVGRQNNCDSLTR-VIEVPYVLP 299

Query: 298 LIAT-RSFDEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLG 356
            +A  R     + G+ DL+                           E Q++F        
Sbjct: 300 FLAEGRISGVTLQGIRDLQQ--------------------------EYQQRF-------- 325

Query: 357 YGLLLKRYTDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTC 416
                                   +D  P ++  +WSFR+M+G   I +     AL  T 
Sbjct: 326 ----------------------GPNDYRPNLFVTYWSFRMMIGLMAIPVLFALIALWLTR 363

Query: 417 RQRITHKPWVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAI-----GEV---LPVTVAVS 468
             +I ++ W    AL ++P P++A  AGW   E GRQPW +     G+    L V   VS
Sbjct: 364 GGQIPNQRWFSWLALLTMPAPFLANSAGWVFTEMGRQPWVVVPNPTGDQLVRLTVKAGVS 423

Query: 469 SQTFENLITSLAIILSLYTVFIFVESYLIVTVARKGP 505
             +   + TSL +   +Y V   +  +L+     +GP
Sbjct: 424 DHSATVVATSLLMFTLVYAVLAVIWCWLLKRYIVEGP 460