Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., cytochrome D ubiquinol oxidase subunit I from Cupriavidus basilensis FW507-4G11

 Score =  222 bits (565), Expect = 3e-62
 Identities = 159/505 (31%), Positives = 223/505 (44%), Gaps = 72/505 (14%)

Query: 6   IDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGI 65
           +D V L+R+QFA    FH LF  ++I +  +L   +  +  TG + +    RFW K+F +
Sbjct: 5   LDPVVLARVQFAANITFHILFPTISISLGWVLLFFKLRFNKTGDERWMAAYRFWVKIFAL 64

Query: 66  NFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRL 125
            FALGV +G+TM FQFGTNW  Y   VG++ G  LA E L AFFLE+T +G+  FG  R+
Sbjct: 65  TFALGVVSGITMSFQFGTNWPGYMETVGNVAGPLLAYEVLTAFFLEATLLGIMLFGMRRV 124

Query: 126 SKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQ 185
           S R H + T LVA G++ SA WIL  N WMQ P G  F     R+ +TS+  V+ NP   
Sbjct: 125 SNRTHTIATLLVAGGTTLSAFWILALNSWMQTPAG--FEIIDGRVHVTSWLAVIFNPSFP 182

Query: 186 VKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDES 245
            +F+H + ++    A  + G+S+Y  L+G        S     T     I   IV GD  
Sbjct: 183 YRFVHMLLASGLTVAFLLAGISAYRWLRGDRAPEVLSSLRTGVTIAAVLIPLQIVAGDLH 242

Query: 246 GYKLGDVQKVKLAAIEAEWHTEP-APAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSF 304
           G      Q  K+AA+E  W TE  APA   LFG+PN      D+ I IP L  L  T   
Sbjct: 243 GLNTLHHQPAKIAAMEGIWKTEKGAPA--VLFGVPNASTQSNDFEIAIPKLASLYLTHHM 300

Query: 305 DEQVTGLHDLRHEHLLRIRNGMVAYQLLERLQAGDASVETQRKFEQTKHDLGYGLLLKRY 364
           D ++ G+                          GD        F   +  +G GLL+   
Sbjct: 301 DGEIKGIDAF-----------------------GDKHPPVAPLFFAFRIMVGVGLLM--- 334

Query: 365 TDTITDANEAQIQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKP 424
                 A+ A   Q      P      W  R+++                     +T   
Sbjct: 335 ----LAASWAAAWQLRRGGQPAP----WMARVLIA--------------------MTFSG 366

Query: 425 WVLKAALWSIPLPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILS 484
           WV   A             GW+V E GRQP+ +  VL    A S      + ++LA+ L+
Sbjct: 367 WVALVA-------------GWYVTEIGRQPYLVYGVLTTAQAASKVPAAMIASTLAMYLA 413

Query: 485 LYTVFIFVESYLIVTVARKGPSSLK 509
           LY   I     ++  +ARK  +  K
Sbjct: 414 LYLALIAAYVSVVFHLARKAGTDPK 438