Pairwise Alignments

Query, 530 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein from Paraburkholderia bryophila 376MFSha3.1

 Score =  219 bits (559), Expect = 1e-61
 Identities = 113/312 (36%), Positives = 175/312 (56%), Gaps = 3/312 (0%)

Query: 6   IDVVELSRLQFALTAMFHFLFVPLTIGMSCLLAIMESIYVLTGKQIYQDMTRFWGKLFGI 65
           +D + L+R QF  T  FH +F  ++IG++  LA++E  ++ TGK +Y  + R+W  +F +
Sbjct: 5   VDALFLARTQFGFTIAFHIIFPAMSIGLASYLAVLEGAWLFTGKPVYLAVFRYWLTIFAV 64

Query: 66  NFALGVTTGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWSRL 125
            F +GV +GL M ++FGTNW+ +++  G + G  +  E L AFFLES F+G+  FG +R+
Sbjct: 65  VFGVGVVSGLVMSYEFGTNWAGFAYRAGPVVGPLMGYEVLTAFFLESGFLGVMLFGMTRV 124

Query: 126 SKRQHLLITWLVALGSSFSALWILVANGWMQNPVGAEFNYQTMRMEMTSFAEVVLNPVAQ 185
             + H L T LVA+G+  SA WIL AN WMQ P G  F     R   T +  ++ NP   
Sbjct: 125 GPKLHFLATVLVAIGTLLSAFWILAANSWMQTPQG--FEMVDGRFVPTDWLSIIFNPSFP 182

Query: 186 VKFLHTVASAYTCGAMFILGVSSYYLLQGRDIEFARRSFAIAATFGMAAIISVIVLGDES 245
            + +H V +AY   A  +  V +++LL+    E AR   ++A           I+ GD  
Sbjct: 183 YRLVHMVLAAYLSVAFIVGAVGAWHLLRDPGNEPARLMASMALWMACIVAPIQILAGDAH 242

Query: 246 GYKLGDVQKVKLAAIEAEWHTEPAPAAFTLFGLPNQKEGKTDYAIKIPYLMGLIATRSFD 305
           G      Q  K+AA+E +W ++P      LFG+PN K   TDYA++IP+L  LI T +++
Sbjct: 243 GVNTLKHQPAKIAALEGDWESKPG-QPLILFGMPNMKTETTDYAVEIPHLGALILTHTWN 301

Query: 306 EQVTGLHDLRHE 317
             + GL +   E
Sbjct: 302 GSIRGLKEFARE 313



 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 38/141 (26%), Positives = 64/141 (45%)

Query: 376 IQQAADDSMPTVWPLFWSFRIMVGCGFIMLFVFGAALLQTCRQRITHKPWVLKAALWSIP 435
           +++ A +  P    +FW+FR+MVG G +M     A+L    R  +    W+ +  +   P
Sbjct: 307 LKEFAREDRPFSPLIFWAFRVMVGLGVLMALTGFASLALRARHSLYRARWLHRLMVAMGP 366

Query: 436 LPWIAIEAGWFVAEYGRQPWAIGEVLPVTVAVSSQTFENLITSLAIILSLYTVFIFVESY 495
              IA+  GW V E GRQP+ +   L    +VS      + TSLA    +Y +       
Sbjct: 367 SGLIALLCGWTVTEVGRQPYTVYGHLRTADSVSPIAAPGVATSLAAFGVVYLIVFGAAMV 426

Query: 496 LIVTVARKGPSSLKTGRYQDE 516
            ++ +  + PS    G  +D+
Sbjct: 427 FVLRLMARPPSLATEGPAKDK 447