Pairwise Alignments

Query, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  330 bits (846), Expect = 3e-95
 Identities = 167/273 (61%), Positives = 211/273 (77%), Gaps = 1/273 (0%)

Query: 32  TKAGVKKTVKKQELSANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLDAKLPM 91
           T A  + T K Q +++ SA+++DL+T++++YS+NPD V PIASVTKLMT ++ LDAK  +
Sbjct: 41  TIAAPRDTAKLQ-VASGSAMLLDLQTDKVVYSSNPDVVVPIASVTKLMTGLIVLDAKQNL 99

Query: 92  DAKLPITIKDAKEMKGVHSRVKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFI 151
           D  + ITI +  EMKGV SRVK+ SE+SR+D+LL+ LMSSENRAAASLAHHYPGGY AFI
Sbjct: 100 DEYISITIANTPEMKGVFSRVKLNSELSRRDVLLIALMSSENRAAASLAHHYPGGYAAFI 159

Query: 152 KAMNAKAKALGMKNTRFVEPTGLSAKNVSTARDLVVLLKASKKYPLLGKLSATDKKTVTF 211
            AMNAKAKALGM +T +VEPTGLS  NVSTARDL  LL A++KYPLL +LS T +KTVTF
Sbjct: 160 AAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLTKLLIAARKYPLLSELSTTKEKTVTF 219

Query: 212 SKPRYTLDFRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKL 271
            KP Y+L FRNT+ LVH  NW I LTKTGFTN AGHCLV+ T+MG R +A V+LD  GK 
Sbjct: 220 RKPVYSLGFRNTDHLVHKANWDIQLTKTGFTNQAGHCLVLVTKMGNRPMALVILDAFGKY 279

Query: 272 SPVGDANRLRTWIETGKVTPLSSEAKQYKKQRS 304
           +   DA+R+R+W+ETGK   + + A QYK  ++
Sbjct: 280 THFADASRIRSWVETGKSAAVPAVALQYKAAKN 312