Pairwise Alignments

Query, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  369 bits (948), Expect = e-107
 Identities = 184/281 (65%), Positives = 230/281 (81%), Gaps = 1/281 (0%)

Query: 28  SSTTTKAGVKKTVKK-QELSANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLD 86
           S+T+ +  VK   K  QEL++ SAL++D KTNE++Y++NP  V PIAS++KLMTA+VTLD
Sbjct: 19  SATSAQGAVKSDAKPTQELASYSALLVDTKTNEVLYASNPHQVVPIASISKLMTAMVTLD 78

Query: 87  AKLPMDAKLPITIKDAKEMKGVHSRVKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGG 146
           AKLP+  K+ + +KD  EMK V SR+++GS +SRK+ +LLTLMSSENRAA +LAHHYPGG
Sbjct: 79  AKLPLGEKIAVEVKDNPEMKNVVSRIRLGSTLSRKEAMLLTLMSSENRAATTLAHHYPGG 138

Query: 147 YKAFIKAMNAKAKALGMKNTRFVEPTGLSAKNVSTARDLVVLLKASKKYPLLGKLSATDK 206
           Y+AF+KAMNAKAKALGM NTRFVEPTGLS  NVSTA DLV LLKA++ YPLLG+LS+T  
Sbjct: 139 YQAFVKAMNAKAKALGMTNTRFVEPTGLSVHNVSTAADLVKLLKAAQDYPLLGQLSSTPS 198

Query: 207 KTVTFSKPRYTLDFRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLD 266
           K+VTF KPRY+L F NTNRLV+ DNW I LTKTGFT+AAGHCLVM T+M +R VAFVVLD
Sbjct: 199 KSVTFGKPRYSLAFYNTNRLVNKDNWDIRLTKTGFTDAAGHCLVMLTKMAKRDVAFVVLD 258

Query: 267 TKGKLSPVGDANRLRTWIETGKVTPLSSEAKQYKKQRSQEQ 307
           + GK + +GDA RL+ W+ETGKV+PL   AK YK+QR +E+
Sbjct: 259 SFGKQTHLGDAGRLKKWLETGKVSPLPDSAKTYKEQRKRER 299