Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., outer membrane protein OmpW from Rahnella sp. WP5

 Score =  228 bits (581), Expect = 6e-65
 Identities = 110/208 (52%), Positives = 138/208 (66%), Gaps = 6/208 (2%)

Query: 10  VLAALSSAPVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNTQLGLTLGYMFT 69
           V AA   A   AHQ GD I R G A+V P + SD VL   S   +N+NTQ+GLTLGYMFT
Sbjct: 9   VAAAAFPAVSSAHQAGDVIFRVGTATVRPTEGSDNVLGLGS-FNINNNTQMGLTLGYMFT 67

Query: 70  DNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEANSTFRPYVGAG 129
           DNI  E+LAATPF HK+      L S G I E K LPP+ M QYYFG+     RPY+G G
Sbjct: 68  DNIGMELLAATPFQHKVG-----LQSTGTIAEVKQLPPSLMAQYYFGDRQDKLRPYLGVG 122

Query: 130 LNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNASVWYANIETTA 189
           +NYTTF+D  FN TG +AGLSDL + DSWG+A   G DY L+D+W +N SVW+ +I+T  
Sbjct: 123 INYTTFYDADFNQTGRDAGLSDLSVKDSWGVATQAGLDYNLDDNWLINMSVWWMDIDTEV 182

Query: 190 TYKAGADAKSTDVEINPWVFMIAGGYKF 217
            +KAG + ++ +  I+PWVFM   GY+F
Sbjct: 183 KFKAGGEQQNINTRIDPWVFMFGAGYRF 210