Pairwise Alignments

Query, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., outer membrane protein from Phaeobacter inhibens DSM 17395

 Score =  129 bits (324), Expect = 4e-35
 Identities = 82/208 (39%), Positives = 116/208 (55%), Gaps = 21/208 (10%)

Query: 1   MKQTICGLAVLAALSS--APVFAHQEGDFIVRAGIASVVPNDSSDKVLNTQSELAVNSNT 58
           M + +  LA+ AAL++   PV A  +GD+ +  GIA+V P   +  V    +   ++ +T
Sbjct: 1   MTRMVSALALSAALAALAGPVLAQSQGDWTLGVGIANVNPKSDNGTVAGAAA--TIDDDT 58

Query: 59  QLGLTLGYMFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQYYFGEA 118
            L  T  Y   DNI  E+LAA+PF H IS +G    +      TKHLPPT  V Y+F   
Sbjct: 59  ALTFTAEYFIRDNIGIELLAASPFEHDISLNGAYTAT------TKHLPPTLSVNYHF-PT 111

Query: 119 NSTFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLNDSWFLNA 178
            + F+P+VG G+NYTTFF+ES     + AG+  + LDDS GLA N+G D+ ++D   L  
Sbjct: 112 QTKFKPFVGVGINYTTFFEES-----SPAGV--ISLDDSVGLALNLGADWQISDRGALRV 164

Query: 179 SVWYANIETTATYKAGADAKSTDVEINP 206
           +V Y +IET  T       K   VEI+P
Sbjct: 165 NVRYMDIETDVTLNG---TKIGTVEIDP 189